RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SMPDL3BQ92485 455 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 LPAR4Q99677 370 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 THUMPD3Q9BV44 507 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 PAK1IP1Q9NWT1 392 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 MKLN1Q9UL63 735 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 BAIAP2Q9UQB8 552 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 PRELID1Q9Y255 219 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 PCDHGB5Q9Y5G0 923 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 AK5Q9Y6K8 562 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TMEM72A0PK05 275 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SH3D21A4FU49 640 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 A6NHS1 94 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 MS4A18H0YCH9 400 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SUSD5O60279 629 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TIPRLO75663 272 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SC5DO75845 299 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 LDLRP01130 860 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CCNYL3P0C7X3 344 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CAPGP40121 348 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SOX3P41225 446 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CLDN6P56747 220 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CLDN18P56856 261 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SLC35A2P78381 396 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 FOXK1P85037 733 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CBFBQ13951 182 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF267Q14586 743 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 EXOC3L2Q2M3D2 409 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 MS4A18Q3C1V0 323 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 C3orf36Q3SXR2 165 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 C10orf128Q5T292 105 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 C1orf189Q5VU69 101 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TNFAIP8L2Q6P589 184 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 OPN5Q6U736 354 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CBLN3Q6UW01 205 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SLC29A4Q7RTT9 530 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 ENTHD1Q8IYW4 607 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 GALNT16Q8N428 558 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 Q8NA96 180 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 GNPDA2Q8TDQ7 276 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 ADAMTS15Q8TE58 950 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 HDAC2Q92769 488 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 MIB2Q96AX9 1013 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF75AQ96N20 296 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 NPAS1Q99742 590 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 WACQ9BTA9 647 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CDCA4Q9BXL8 241 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 SMPD3Q9NY59 655 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 CNOT2Q9NZN8 540 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TMEM5Q9Y2B1 443 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 USP24Q9UPU5 2620 aa4.38□□□□□ -1.71
R3HDM1-203ENST00000409606 TRBV11-1A0A0K0K1C0 115 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 A0A1B0GWA3 101 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF716A6NP11 495 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 A8MU76 341 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 C9J4A7 227 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 G3V2T6 193 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 H3BNH8 94 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ITGA10O75578 1167 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 OR7A10O76100 309 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 EIF2S1P05198 315 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 JMJD7P0C870 316 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 RBMS1P29558 406 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 MSX2P35548 267 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 RANBP1P43487 201 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 POLR2HP52434 150 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ATP1A4Q13733 1029 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 FLYWCH1Q4VC44 716 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ACER2Q5QJU3 275 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 LINC01590Q5TEZ4 76 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 TMEM123Q8N131 208 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 COX18Q8N8Q8 333 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 CLIP3Q96DZ5 547 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 LRR1Q96L50 414 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 SMURF2Q9HAU4 748 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 BCO1Q9HAY6 547 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 LRCH1Q9Y2L9 728 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 PTPRZ1P23471 2315 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 UNC13CQ8NB66 2214 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ACACBO00763 2458 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF701M0R085 212 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 E2F6O75461 281 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ANGPTL1O95841 491 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 GALP22466 123 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 CTSSP25774 331 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 RRM2P31350 389 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 GNALP38405 381 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 EIF1P41567 113 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ALDH9A1P49189 494 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 FOXL2P58012 376 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 CHRNB3Q05901 458 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 ST3GAL3Q11203 375 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 MAD2L1BPQ15013 274 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 MINDY4Q4G0A6 757 aa4.37□□□□□ -1.71
R3HDM1-203ENST00000409606 RBM48Q5RL73 367 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms