RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ERVK13-1Q9NX77 482 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 SPEGQ15772 3267 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 IGLV3-12A0A075B6K2 115 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 TSPAN2O60636 221 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 DCDP81605 110 aaKnown RBP18.95■□□□□ 0.62
USP39-203ENST00000409470 CRMP1Q14194 572 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 BTLAQ7Z6A9 289 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 CYB561A3Q8NBI2 242 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 OR5M3Q8NGP4 307 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 CEP76Q8TAP6 659 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 PTP4A1Q93096 173 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 TMEM203Q969S6 136 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ZC3H10Q96K80 434 aaKnown RBP18.95■□□□□ 0.62
USP39-203ENST00000409470 DACH2Q96NX9 599 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 CCNL2Q96S94 520 aaPredicted RBP18.95■□□□□ 0.62
USP39-203ENST00000409470 SLC19A3Q9BZV2 496 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 A3GALT2U3KPV4 340 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 hCG_2014768A0A024R1R8 64 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 SLC22A31A6NKX4 558 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 GMFGO60234 142 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 CER1O95813 267 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 ABCD3P28288 659 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 TMED1Q13445 227 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 ZNF791Q3KP31 576 aaPredicted RBP18.94■□□□□ 0.62
USP39-203ENST00000409470 TRIM61Q5EBN2 209 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 ARMC4Q5T2S8 1044 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 ATG4DQ86TL0 474 aaPredicted RBP18.94■□□□□ 0.62
USP39-203ENST00000409470 MFSD4AQ8N468 514 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 LAT2Q9GZY6 243 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 TOR4AQ9NXH8 423 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 ZNF337Q9Y3M9 751 aa18.94■□□□□ 0.62
USP39-203ENST00000409470 IDSB3KWA1 339 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 HCRTR2O43614 444 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 OR7A10O76100 309 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 RPL4P36578 427 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 DBPQ10586 325 aaPredicted RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 TPBGQ13641 420 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 ZNF362Q5T0B9 420 aaPredicted RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 ANKRD37Q7Z713 158 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 MARCH3Q86UD3 253 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 PPP1R3BQ86XI6 285 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 TRMT61AQ96FX7 289 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 TBL1XR1Q9BZK7 514 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 NXF2Q9GZY0 626 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 RERGLQ9H628 205 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 B3GNT3Q9Y2A9 372 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 ASCC3Q8N3C0 2202 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 IGKV1D-42A0A075B6H8 117 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 NDUFB5O43674 189 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 S100A5P33763 92 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 HOXD12P35452 270 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 SLC6A8P48029 635 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 ACBD7Q8N6N7 88 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 C10orf53Q8N6V4 93 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 FAM98AQ8NCA5 519 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 OR52E2Q8NGJ4 325 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 METTL21AQ8WXB1 218 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 GFM1Q96RP9 751 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 TEAD3Q99594 435 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 GTPBP2Q9BX10 602 aaKnown RBP18.93■□□□□ 0.62
USP39-203ENST00000409470 JAM3Q9BX67 310 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 RTN4RQ9BZR6 473 aa18.93■□□□□ 0.62
USP39-203ENST00000409470 C12orf71A8MTZ7 269 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 MCIDASD6RGH6 385 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 J3QRE1 110 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 PNLIPRP2P54317 469 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 ZNF117Q03924 483 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 ZFP41Q8N8Y5 198 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 ZNF441Q8N8Z8 693 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 ZNF485Q8NCK3 441 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 OR52N1Q8NH53 320 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 SPRYD4Q8WW59 207 aaPredicted RBP18.92■□□□□ 0.62
USP39-203ENST00000409470 KISS1RQ969F8 398 aaPredicted RBP18.92■□□□□ 0.62
USP39-203ENST00000409470 C1GALT1C1Q96EU7 318 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 TBX5Q99593 518 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 ZNF649Q9BS31 505 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 APMAPQ9HDC9 416 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 IER3IP1Q9Y5U9 82 aa18.92■□□□□ 0.62
USP39-203ENST00000409470 CCDC182A6NF36 153 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 ZNF670-ZNF695F2Z2N8 137 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 SLC30A4O14863 429 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 PLD2O14939 933 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 ALOX12BO75342 701 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 CLUP10909 449 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 ITPKBP27987 946 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 GRK6P43250 576 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 RPS25P62851 125 aaKnown RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 RNF4P78317 190 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 GXYLT1Q4G148 440 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 TMPRSS11AQ6ZMR5 421 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 OVCH1Q7RTY7 1134 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 C17orf47Q8NEP4 570 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 NECAB3Q96P71 396 aaPredicted RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 TMEM43Q9BTV4 400 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 NUAK2Q9H093 628 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 TXNL4BQ9NX01 149 aaKnown RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 OCIAD1Q9NX40 245 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 CHRNA9Q9UGM1 479 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 YARS2Q9Y2Z4 477 aaKnown RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 A0A1W2PQD3 144 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms