RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 FKBP9P1Q75LS8 142 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 RANBP3LQ86VV4 465 aaPredicted RBP18.72■□□□□ 0.59
C4orf48-201ENST00000409248 LILRB4Q8NHJ6 448 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 MBD3L2Q8NHZ7 208 aaPredicted RBP18.72■□□□□ 0.59
C4orf48-201ENST00000409248 VANGL1Q8TAA9 524 aaPredicted RBP18.72■□□□□ 0.59
C4orf48-201ENST00000409248 TMEM234Q8WY98 164 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 SMPDL3BQ92485 455 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 HSH2DQ96JZ2 352 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 TESQ9UGI8 421 aaKnown RBP18.72■□□□□ 0.59
C4orf48-201ENST00000409248 PRDM4Q9UKN5 801 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 SH3GLB1Q9Y371 365 aa18.72■□□□□ 0.59
C4orf48-201ENST00000409248 FAM90A27PA6NNH2 459 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 CLCA1A8K7I4 914 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 SHISA8B8ZZ34 492 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 AP3D1O14617 1153 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 SEC14L5O43304 696 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 CIB2O75838 187 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 RPS3AP61247 264 aaKnown RBP18.71■□□□□ 0.59
C4orf48-201ENST00000409248 FOXF1Q12946 379 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 FLOT2Q14254 428 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 IFI44LQ53G44 452 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 SEM1Q6ZVN7 128 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 VTCN1Q7Z7D3 282 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 CARM1Q86X55 608 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 GEMIN6Q8WXD5 167 aaKnown RBP18.71■□□□□ 0.59
C4orf48-201ENST00000409248 ST8SIA1Q92185 356 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 POP5Q969H6 163 aaKnown RBP18.71■□□□□ 0.59
C4orf48-201ENST00000409248 ZFP3Q96NJ6 502 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 UCN2Q96RP3 112 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 TM9SF2Q99805 663 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 KLHDC3Q9BQ90 382 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 CLCF1Q9UBD9 225 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 POMPQ9Y244 141 aa18.71■□□□□ 0.59
C4orf48-201ENST00000409248 UTP20O75691 2785 aaKnown RBP18.7■□□□□ 0.58
C4orf48-201ENST00000409248 TMEM229AB2RXF0 380 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ACOT8O14734 319 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ADAM11O75078 769 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 PRG2P13727 222 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ADH6P28332 368 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 CEACAM8P31997 349 aaPredicted RBP18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ACAA2P42765 397 aaKnown RBP18.7■□□□□ 0.58
C4orf48-201ENST00000409248 IDH2P48735 452 aaKnown RBP18.7■□□□□ 0.58
C4orf48-201ENST00000409248 HOXC5Q00444 222 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 CDSNQ15517 529 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 TOMM34Q15785 309 aaPredicted RBP18.7■□□□□ 0.58
C4orf48-201ENST00000409248 SLC25A35Q3KQZ1 300 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ADGRE4PQ86SQ3 457 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 WNT2BQ93097 391 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 MRGPRX4Q96LA9 322 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ZNF559Q9BR84 538 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 KCNJ16Q9NPI9 418 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 ACER3Q9NUN7 267 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 V9GYQ6 96 aa18.7■□□□□ 0.58
C4orf48-201ENST00000409248 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 KDM4EB2RXH2 506 aaPredicted RBP18.69■□□□□ 0.58
C4orf48-201ENST00000409248 DVL2O14641 736 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 FMO6PO60774 539 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 PRKD3O94806 890 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 PRKCAP17252 672 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 PSMA4P25789 261 aaKnown RBP18.69■□□□□ 0.58
C4orf48-201ENST00000409248 ZNF136P52737 540 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 SESN3P58005 492 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 RAC1P63000 192 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 WBP2NLQ6ICG8 309 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 P4HA3Q7Z4N8 544 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 CADM2Q8N3J6 435 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 OR6T1Q8NGN1 323 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 PYURFQ96I23 114 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 DOCK7Q96N67 2140 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 RAB3IPQ96QF0 476 aaPredicted RBP18.69■□□□□ 0.58
C4orf48-201ENST00000409248 TRIM2Q9C040 744 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 RPS6KB2Q9UBS0 482 aa18.69■□□□□ 0.58
C4orf48-201ENST00000409248 KIAA1549Q9HCM3 1950 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 SLC22A20A6NK97 555 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 AQP12BA6NM10 295 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 GJE1A6NN92 205 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 ETV2O00321 342 aaPredicted RBP18.68■□□□□ 0.58
C4orf48-201ENST00000409248 TOXO94900 526 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 IFNW1P05000 195 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 TNFRSF1BP20333 461 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 COL8A1P27658 744 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 SLC1A3P43003 542 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 HTR3AP46098 478 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 OR1E2P47887 323 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 CLDN20P56880 219 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 SLC25A53Q5H9E4 307 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 C1orf146Q5VVC0 180 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 GRINAQ7Z429 371 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 AQP12AQ8IXF9 295 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 C9orf106Q8NAJ2 232 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 OR4D11Q8NGI4 311 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 POC1BQ8TC44 478 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 MCHR1Q99705 422 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 WFDC6Q9BQY6 131 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 TMEM27Q9HBJ8 222 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 PAQR5Q9NXK6 330 aaPredicted RBP18.68■□□□□ 0.58
C4orf48-201ENST00000409248 ZNF175Q9Y473 711 aa18.68■□□□□ 0.58
C4orf48-201ENST00000409248 SETXQ7Z333 2677 aaKnown RBP18.68■□□□□ 0.58
C4orf48-201ENST00000409248 HEATR5AQ86XA9 2040 aa18.67■□□□□ 0.58
C4orf48-201ENST00000409248 ERICH4A6NGS2 130 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms