RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ZNF418Q8TF45 676 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SLC25A43Q8WUT9 341 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 ARL5BQ96KC2 179 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 ACTRT3Q9BYD9 372 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 LAT2Q9GZY6 243 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 C1orf109Q9NX04 203 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 ZNF180Q9UJW8 692 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 FAF1Q9UNN5 650 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 CCL27Q9Y4X3 112 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 TGP01266 2768 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SERINC4A6NH21 518 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 PMS2P2O95744 297 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 GSTA1P08263 222 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 PGCP20142 388 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 OR2B6P58173 313 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 THSD4Q6ZMP0 1018 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 DEF8Q6ZN54 512 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 PEG10Q86TG7 708 aaKnown RBP14.5□□□□□ -0.09
CHMP3-203ENST00000409225 GLCCI1Q86VQ1 547 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 ZCCHC24Q8N2G6 241 aaKnown RBP14.5□□□□□ -0.09
CHMP3-203ENST00000409225 TMEM234Q8WY98 164 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 SLC38A2Q96QD8 506 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 CCT7Q99832 543 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 PLK3Q9H4B4 646 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 TNFRSF12AQ9NP84 129 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 CTPS2Q9NRF8 586 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 ACER3Q9NUN7 267 aa14.5□□□□□ -0.09
CHMP3-203ENST00000409225 SPIN1Q9Y657 262 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-203ENST00000409225 ERCC1P07992 297 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-203ENST00000409225 UBTFL6P0CB48 400 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-203ENST00000409225 IFNGR1P15260 489 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 MPGP29372 298 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 EFNB3Q15768 340 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 LSRQ86X29 649 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-203ENST00000409225 FAM216AQ8WUB2 273 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 METTL2AQ96IZ6 378 aaKnown RBP14.49□□□□□ -0.09
CHMP3-203ENST00000409225 OR11A1Q9GZK7 315 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 PARPBPQ9NWS1 579 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 CHRNA9Q9UGM1 479 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 SLC9A8Q9Y2E8 581 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 PCDHB14Q9Y5E9 798 aa14.49□□□□□ -0.09
CHMP3-203ENST00000409225 CENPVL1A0A0U1RR11 272 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 TRIM77I1YAP6 450 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 DNAJA2O60884 412 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SKAP2O75563 359 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 PDE5AO76074 875 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 CSTAP01040 98 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 CRYAAP02489 173 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 PRPH2P23942 346 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 APOBEC1P41238 236 aaKnown RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SLC1A3P43003 542 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 CCT3P49368 545 aaKnown RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 RPL38P63173 70 aaKnown RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SCGB2A2Q13296 93 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 GPR68Q15743 365 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SPDYE7PQ495Y7 208 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 CLEC6AQ6EIG7 209 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SHQ1Q6PI26 577 aaKnown RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 UGT2A3Q6UWM9 527 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 ZNF786Q8N393 782 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 OR56A1Q8NGH5 318 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 WDR60Q8WVS4 1066 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 NEU4Q8WWR8 484 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-203ENST00000409225 FCRL1Q96LA6 429 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 KATNB1Q9BVA0 655 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 CCDC106Q9BWC9 280 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 SAP130Q9H0E3 1048 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 LPAR2Q9HBW0 351 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 GPATCH2Q9NW75 528 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 KCNE5Q9UJ90 142 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 PCDHB10Q9UN67 800 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 HDGFL3Q9Y3E1 203 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 FLVCR1Q9Y5Y0 555 aa14.48□□□□□ -0.09
CHMP3-203ENST00000409225 TRRAPQ9Y4A5 3859 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 B4DSR2 109 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 LYNX1G3V0Z9 82 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 hCG_2039718K7EN88 272 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 SLC28A1O00337 649 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 DNPH1O43598 174 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 KRT16P08779 473 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 LYNX1P0DP58 116 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 UROSP10746 265 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 CCNA2P20248 432 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 RIN1Q13671 783 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 PRR31Q5SQ13 230 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 C1QTNF12Q5T7M4 302 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 TIFABQ6ZNK6 161 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 FRMD7Q6ZUT3 714 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 OLIG3Q7RTU3 272 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 RELL1Q8IUW5 271 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 SVOPLQ8N434 492 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 OR5D16Q8NGK9 328 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 OR2T11Q8NH01 316 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 ZNF563Q8TA94 476 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 UBASH3BQ8TF42 649 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 OR7D2Q96RA2 312 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 SDF2Q99470 211 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 RBM4Q9BWF3 364 aaKnown RBP14.47□□□□□ -0.09
CHMP3-203ENST00000409225 NMUR2Q9GZQ4 415 aa14.47□□□□□ -0.09
CHMP3-203ENST00000409225 HIF1ANQ9NWT6 349 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms