RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 PDCD2Q16342 344 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 C9orf135Q5VTT2 229 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 THSD4Q6ZMP0 1018 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 SZRD1Q7Z422 152 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 SPATA19Q7Z5L4 167 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 GLCCI1Q86VQ1 547 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 CNPY4Q8N129 248 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 SVOPLQ8N434 492 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 COX18Q8N8Q8 333 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 NUP43Q8NFH3 380 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 MS4A4EQ96PG1 132 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 SAP130Q9H0E3 1048 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 NSRP1Q9H0G5 558 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 CA10Q9NS85 328 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF180Q9UJW8 692 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 SPEF1Q9Y4P9 236 aa11.19□□□□□ -0.62
CHRNA1-203ENST00000409219 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 MAGEA12P43365 314 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 RIN1Q13671 783 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 EFNB3Q15768 340 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 EXOSC6Q5RKV6 272 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 LRRC34Q8IZ02 419 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF527Q8NB42 609 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 METTL6Q8TCB7 284 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 KCNA7Q96RP8 456 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF382Q96SR6 550 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 QRSL1Q9H0R6 528 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 RAB1BQ9H0U4 201 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 PLK3Q9H4B4 646 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 GIN1Q9NXP7 522 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 DCTN4Q9UJW0 460 aa11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 POLR3HQ9Y535 204 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-203ENST00000409219 VWFP04275 2813 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 B4DSR2 109 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 PDPK1O15530 556 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 PDE5AO76074 875 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 OR4A8P0C604 315 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 EPHA1P21709 976 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 GPC1P35052 558 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 LIMS1P48059 325 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 SERPINB4P48594 390 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 POU6F2P78424 691 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 QPRTQ15274 297 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 TSNAXIP1Q2TAA8 658 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 KLHL26Q53HC5 615 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 SPDYAQ5MJ70 313 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 SHQ1Q6PI26 577 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 UGT2A3Q6UWM9 527 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 TMPPEQ6ZT21 453 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 GPRIN3Q6ZVF9 776 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF786Q8N393 782 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 ANKRD42Q8N9B4 389 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 DYDC1Q8WWB3 177 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 CIDECQ96AQ7 238 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 C16orf58Q96GQ5 468 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 USP22Q9UPT9 525 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 TIMM22Q9Y584 194 aa11.17□□□□□ -0.62
CHRNA1-203ENST00000409219 IGHV1-18A0A0C4DH31 117 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 SULT2B1O00204 365 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 SUPT7LO94864 414 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 VIMP08670 466 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 ALOX5P09917 674 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 CSNK2A1P68400 391 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 TIGD2Q4W5G0 525 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 UNC50Q53HI1 259 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF385BQ569K4 471 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 SYT14P1Q58G82 188 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 CASP12Q6UXS9 341 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 IKBIPQ70UQ0 350 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 MTDHQ86UE4 582 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 ZCCHC24Q8N2G6 241 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 TMEM151AQ8N4L1 468 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 TMCO5AQ8N6Q1 288 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 RFWD2Q8NHY2 731 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 MRPL57Q9BQC6 102 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 BTBD2Q9BX70 525 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 MRPL46Q9H2W6 279 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 SLC7A10Q9NS82 523 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 PCDHB14Q9Y5E9 798 aa11.16□□□□□ -0.62
CHRNA1-203ENST00000409219 A0A1W2PPM1 405 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 TM9SF1O15321 606 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 MRPL33O75394 65 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 HSPA4LO95757 839 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 INHBAP08476 426 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms