RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SSX4O60224 188 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 SPAG7O75391 227 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 SKAP2O75563 359 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 UGT2B17O75795 530 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 CSTAP01040 98 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 UBTFL6P0CB48 400 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 G6PDP11413 515 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 COX5AP20674 150 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 PTNP21246 168 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 ARRB2P32121 409 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 SOAT1P35610 550 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 APOBEC1P41238 236 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 CLDN8P56748 225 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 EMX2Q04743 252 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 MAD2L1Q13257 205 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 PDK3Q15120 406 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 NRF1Q16656 503 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 SYT14P1Q58G82 188 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 FBXW9Q5XUX1 488 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 EIF3MQ7L2H7 374 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 OLIG3Q7RTU3 272 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 CLECL1Q8IZS7 167 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 CLEC4FQ8N1N0 589 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 UBE2J2Q8N2K1 259 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 RIBC1Q8N443 379 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 TCP10LQ8TDR4 215 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 TUBGCP3Q96CW5 907 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 ADAD1Q96M93 576 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 SERHL2Q9H4I8 314 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 NPAP1Q9NZP6 1156 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 EMC3Q9P0I2 261 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 MGAT4BQ9UQ53 548 aa8.08□□□□□ -1.12
NIF3L1-203ENST00000409129 ALPK2Q86TB3 2170 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 CIB4A0PJX0 185 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ZNF716A6NP11 495 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 A8MV72 311 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 E7EQL1 145 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ANKRD28O15084 1053 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 AGR2O95994 175 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 GUSBP08236 651 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 TFPIP10646 304 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 PTAFRP25105 342 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 FKBP2P26885 142 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 TTKP33981 857 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 PGM1P36871 562 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 DSCR9P59020 149 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 IRX1P78414 480 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 MAPK14Q16539 360 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 SMU1Q2TAY7 513 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 CHRFAM7AQ494W8 412 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 AP1ARQ63HQ0 302 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ABLIM2Q6H8Q1 611 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 OR4F3Q6IEY1 312 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 KLHL17Q6TDP4 642 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 TMEM108Q6UXF1 575 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 C16orf62Q7Z3J2 963 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 OR10H5Q8NGA6 315 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 OR52N5Q8NH56 324 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ZNF563Q8TA94 476 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 MIPOL1Q8TD10 442 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 SLC25A43Q8WUT9 341 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 XAGE5Q8WWM1 108 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 OIT3Q8WWZ8 545 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ZHX1-C8orf76Q96EF9 292 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 SLC35G5Q96KT7 338 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 DHRS9Q9BPW9 319 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 CCDC106Q9BWC9 280 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 PLA2G12AQ9BZM1 189 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ZNF350Q9GZX5 532 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 OR51I1Q9H343 314 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 CTPS2Q9NRF8 586 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 CBLN4Q9NTU7 201 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 EXD2Q9NVH0 621 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 ASIC5Q9NY37 505 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 NOP53Q9NZM5 478 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 PCDHGB4Q9UN71 923 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 NOSIPQ9Y314 301 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 SLC25A15Q9Y619 301 aa8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 SPIN1Q9Y657 262 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-203ENST00000409129 MGAM2Q2M2H8 2515 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 IGHV4-30-2A0A087WSY4 118 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 RNF103-CHMP3A0A140T963 221 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 CCT8L1PA6NM43 557 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 RNASET2O00584 256 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 GPR171O14626 319 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 SPRY1O43609 319 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 GPRIN2O60269 458 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 MRPL33O75394 65 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 RAD51DO75771 328 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 PMS2P2O95744 297 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 IGHV3-9P01782 118 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 BPGMP07738 259 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 NUDT17P0C025 328 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 DHRS4L1P0CG22 281 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 OR12D1P0DN82 309 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 CD40P25942 277 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 NTF4P34130 210 aa8.06□□□□□ -1.12
NIF3L1-203ENST00000409129 RYKP34925 604 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms