RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ZNF611Q8N823 705 aa19.91■□□□□ 0.78
KDELR3-202ENST00000409006 SLC25A43Q8WUT9 341 aaPredicted RBP19.91■□□□□ 0.78
KDELR3-202ENST00000409006 TLCD1Q96CP7 247 aa19.91■□□□□ 0.78
KDELR3-202ENST00000409006 MAELQ96JY0 434 aaKnown RBP19.91■□□□□ 0.78
KDELR3-202ENST00000409006 COX4I2Q96KJ9 171 aa19.91■□□□□ 0.78
KDELR3-202ENST00000409006 ZNF716A6NP11 495 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 RAMP1O60894 148 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 RPS4Y1P22090 263 aaKnown RBP19.9■□□□□ 0.78
KDELR3-202ENST00000409006 IGHV1-2P23083 117 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 MVDP53602 400 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 SLC18A1P54219 525 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 CSNK2A1P68400 391 aaPredicted RBP19.9■□□□□ 0.78
KDELR3-202ENST00000409006 CAPRIN1Q14444 709 aaKnown RBP19.9■□□□□ 0.78
KDELR3-202ENST00000409006 NXNQ6DKJ4 435 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 CLEC9AQ6UXN8 241 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 DNAJC14Q6Y2X3 702 aaPredicted RBP19.9■□□□□ 0.78
KDELR3-202ENST00000409006 LRRC74BQ6ZQY2 392 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 TRIML2Q8N7C3 387 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 HSD17B8Q92506 261 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 MANSC1Q9H8J5 431 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 TMBIM4Q9HC24 238 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 LIPT1Q9Y234 373 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 RNF115Q9Y4L5 304 aa19.9■□□□□ 0.78
KDELR3-202ENST00000409006 CLOCKO15516 846 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 LY6G6DO95868 133 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 IGHV3-9P01782 118 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 PAX1P15863 534 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 PDCD4Q53EL6 469 aaKnown RBP19.89■□□□□ 0.77
KDELR3-202ENST00000409006 GALNT5Q7Z7M9 940 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 CCDC103Q8IW40 242 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 PIWIL2Q8TC59 973 aaKnown RBP19.89■□□□□ 0.77
KDELR3-202ENST00000409006 TMEM171Q8WVE6 324 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 OR52B2Q96RD2 323 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 ZBTB18Q99592 522 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 POTEKPQ9BYX7 375 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 LAMP3Q9UQV4 416 aa19.89■□□□□ 0.77
KDELR3-202ENST00000409006 IGKV3D-15A0A087WSY6 115 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 TMEM72A0PK05 275 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 DPRXA6NFQ7 191 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 RFXANKO14593 260 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 SMAD7O15105 426 aaKnown RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 SLC22A3O75751 556 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 PMS2P2O95744 297 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 GTDC1Q4AE62 458 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 BEND6Q5SZJ8 279 aaPredicted RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 MRPL2Q5T653 305 aaKnown RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 ATG16L1Q676U5 607 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 ADAM5Q6NVV9 412 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 ZNF100Q8IYN0 542 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 GLB1L3Q8NCI6 653 aaPredicted RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 OR9I1Q8NGQ6 314 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 WDR60Q8WVS4 1066 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 MTHFD2LQ9H903 347 aaPredicted RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 ZNF701Q9NV72 531 aaPredicted RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 RLIMQ9NVW2 624 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 OSGIN1Q9UJX0 560 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 HDGFL3Q9Y3E1 203 aa19.88■□□□□ 0.77
KDELR3-202ENST00000409006 SPIN1Q9Y657 262 aaPredicted RBP19.88■□□□□ 0.77
KDELR3-202ENST00000409006 TMED7-TICAM2A0A0A6YYA0 188 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 CD3EP07766 207 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 NR2F1P10589 423 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 IMPDH2P12268 514 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 IDO1P14902 403 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 COX5AP20674 150 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 BSPH1Q075Z2 132 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 PDK3Q15120 406 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 STK11Q15831 433 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 CMIPQ8IY22 773 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 KBTBD8Q8NFY9 601 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 ESRP2Q9H6T0 727 aaKnown RBP19.87■□□□□ 0.77
KDELR3-202ENST00000409006 NKIRAS1Q9NYS0 192 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 NPAP1Q9NZP6 1156 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 TMED7Q9Y3B3 224 aa19.87■□□□□ 0.77
KDELR3-202ENST00000409006 FN1P02751 2386 aaKnown RBP19.87■□□□□ 0.77
KDELR3-202ENST00000409006 ZC3H12DA2A288 527 aaKnown RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 SLCO1B7G3V0H7 640 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 KRT75O95678 551 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 IL6P05231 212 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 HEXAP06865 529 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 SOD3P08294 240 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 ETFAP13804 333 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 IL7RP16871 459 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 TACR3P29371 465 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 OR2B6P58173 313 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 LRRC74AQ0VAA2 488 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 VRK2Q86Y07 508 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 ZNF433Q8N7K0 673 aaPredicted RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 AURKBQ96GD4 344 aaPredicted RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 BDH2Q9BUT1 245 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 HEATR1Q9H583 2144 aaKnown RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 SDR39U1Q9NRG7 319 aaPredicted RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 TMEM181Q9P2C4 612 aa19.86■□□□□ 0.77
KDELR3-202ENST00000409006 NOSIPQ9Y314 301 aaKnown RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 NSD1Q96L73 2696 aaPredicted RBP19.86■□□□□ 0.77
KDELR3-202ENST00000409006 PGM3O95394 542 aa19.85■□□□□ 0.77
KDELR3-202ENST00000409006 CNOT4O95628 575 aaKnown RBP19.85■□□□□ 0.77
KDELR3-202ENST00000409006 DBIP07108 87 aaKnown RBP19.85■□□□□ 0.77
KDELR3-202ENST00000409006 DANCRP0C864 163 aa19.85■□□□□ 0.77
KDELR3-202ENST00000409006 GKN3PP0CG01 181 aa19.85■□□□□ 0.77
KDELR3-202ENST00000409006 CLK1P49759 484 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms