RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 SPIBQ01892 262 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 TGFBR3Q03167 851 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 RGS1Q08116 209 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 SLC39A6Q13433 755 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 SCARB2Q14108 478 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 RCN2Q14257 317 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 LAGE3Q14657 143 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 ARL6IP1Q15041 203 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 NDUFA9Q16795 377 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 RFX4Q33E94 735 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 BOLA3Q53S33 107 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 GLRA4Q5JXX5 417 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 FRMPD2BQ6IN97 320 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 C11orf71Q6IPW1 123 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 FAM159AQ6UWV7 190 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 LYPD2Q6UXB3 125 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 ZNF620Q6ZNG0 422 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 Q6ZS52 159 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 TOM1L2Q6ZVM7 507 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 CYS1Q717R9 158 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 PRSS41Q7RTY9 318 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 GALNTL5Q7Z4T8 443 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 ZDHHC21Q8IVQ6 265 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 RDH10Q8IZV5 341 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 PGAM4Q8N0Y7 254 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 OR8H3Q8N146 312 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 LINC01561Q8N1V8 128 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 C15orf56Q8N910 161 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 OR10G3Q8NGC4 313 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 OR9G1Q8NH87 305 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 BRSK1Q8TDC3 778 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 ZFP90Q8TF47 636 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 DTD2Q96FN9 168 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 VMP1Q96GC9 406 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 OR5B2Q96R09 309 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 FTHL17Q9BXU8 183 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 DUSP16Q9BY84 665 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 SIRPDQ9H106 197 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 DEFB127Q9H1M4 99 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 ZNF385DQ9H6B1 395 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 COPS7BQ9H9Q2 264 aaPredicted RBP0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 NOX3Q9HBY0 568 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 SLC40A1Q9NP59 571 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 TRPV5Q9NQA5 729 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 HOMER3Q9NSC5 361 aa0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 WARS2Q9UGM6 360 aaKnown RBP0.34□□□□□ -2.36
MIR548I3-201ENST00000408378 CARMIL3Q8ND23 1372 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 PRRC2BQ5JSZ5 2229 aaKnown RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 IGHV1OR21-1A0A087WYE8 117 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 A0A1B0GW55 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 A6NIZ1 184 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 E9PMD0 336 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 K7EM74 188 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SGK494L7N484 410 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 FOXE1O00358 373 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 AGPAT2O15120 278 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 ADAM12O43184 909 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 RBFOX2O43251 390 aaKnown RBP eCLIP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 PRKYO43930 277 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 JAK2O60674 1132 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 GNA14O95837 355 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 CENPBP07199 599 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 HBQ1P09105 142 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L2P0CJ85 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L3P0CJ86 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L5P0CJ88 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L6P0CJ89 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L7P0CJ90 424 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 ATP6V1B2P21281 511 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 BDNFP23560 247 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 PRDX2P32119 198 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SHMT2P34897 504 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 TCF7P36402 384 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SLC26A3P40879 764 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 PRKXP51817 358 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 HNRNPFP52597 415 aaKnown RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 BIDP55957 195 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 KIAA1024LP59773 190 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 RAP1BP61224 184 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 MEF2CQ06413 473 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SYCNQ0VAF6 134 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SMARCB1Q12824 385 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 RAB40BQ12829 278 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 BAMBIQ13145 260 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 KIAA0087Q14695 138 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SLMAPQ14BN4 828 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 CARTPTQ16568 116 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 C1orf94Q6P1W5 598 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 FAHD2BQ6P2I3 314 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 DUX4L9Q6RFH8 374 aaPredicted RBP0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 TMEM270Q6UE05 265 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 LINC00336Q6ZUF6 198 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 ACOT7LQ6ZUV0 252 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 VPS36Q86VN1 386 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 SVOPLQ8N434 492 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 CCDC89Q8N998 374 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 GATSQ8NAP1 163 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 LEMD2Q8NC56 503 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 STKLD1Q8NE28 680 aa0.33□□□□□ -2.36
MIR548I3-201ENST00000408378 ANKRD20A12PQ8NF67 263 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms