RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RBM18Q96H35 190 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 FAM46AQ96IP4 442 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CTRCQ99895 268 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 WFDC6Q9BQY6 131 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 LMF2Q9BU23 707 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 MED18Q9BUE0 208 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 G6PC3Q9BUM1 346 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 JAM3Q9BX67 310 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 ASPNQ9BXN1 380 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 B3GNT4Q9C0J1 378 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 MAT2BQ9NZL9 334 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 SERTAD3Q9UJW9 196 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 MED31Q9Y3C7 131 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 PMF1-BGLAPU3KQ54 211 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 TTLL8A6PVC2 850 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 SURF4O15260 269 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 KLF4O43474 513 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 FGF17O60258 216 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 GAAP10253 952 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 GALP22466 123 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 HTR1FP30939 366 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 GABRA3P34903 492 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 MAP3K8P41279 467 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 GABRA4P48169 554 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 STX4Q12846 297 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 TPBGQ13641 420 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 SERTAD2Q14140 314 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 OR1Q1Q15612 314 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 TRMT12Q53H54 448 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 DCAF12Q5T6F0 453 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 TMPRSS11AQ6ZMR5 421 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 PLEKHG7Q6ZR37 379 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 COMTD1Q86VU5 262 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 BPHLQ86WA6 291 aaPredicted RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 PPP1R3BQ86XI6 285 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 KIF18BQ86Y91 864 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 OR4N5Q8IXE1 308 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 GALNT12Q8IXK2 581 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF440Q8IYI8 595 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 KLHL36Q8N4N3 616 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 IQCF1Q8N6M8 205 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 OR52N1Q8NH53 320 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 TMEM239Q8WW34 195 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF501Q96CX3 271 aaPredicted RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 LRFN5Q96NI6 719 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 CNPPD1Q9BV87 410 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 CDADC1Q9BWV3 514 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 QRSL1Q9H0R6 528 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 HHATLQ9HCP6 504 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 APMAPQ9HDC9 416 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 SLC7A7Q9UM01 511 aa11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 EXOGQ9Y2C4 368 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-203ENST00000407082 BSNQ9UPA5 3926 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 A0A1W2PS29 197 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 CDHR4A6H8M9 788 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 DSCR3O14972 297 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 AKAP8O43823 692 aaKnown RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 HCN1O60741 890 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PRAMEF2O60811 474 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 LDB3O75112 727 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 OR2B3O76000 313 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 NSA2O95478 260 aaKnown RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PTTG1O95997 202 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 CTSBP07858 339 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 FGF5P12034 268 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 DRD5P21918 477 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 TRHRP34981 398 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PTGER1P34995 402 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 BDH1Q02338 343 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 GPR50Q13585 617 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 TRAM1Q15629 374 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 SSX1Q16384 188 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PRTGQ2VWP7 1150 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 FLYWCH1Q4VC44 716 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 HSDL2Q6YN16 418 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 TMPRSS11FQ6ZWK6 438 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 ZBTB46Q86UZ6 589 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 NKAIN4Q8IVV8 208 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PHC2Q8IXK0 858 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 NRMQ8IXM6 262 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 GPR135Q8IZ08 494 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 POGLUT1Q8NBL1 392 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 OR1L3Q8NH93 324 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms