RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CDCP1Q9H5V8 836 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 SCN3BQ9NY72 215 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 CDH10Q9Y6N8 788 aa19.14■□□□□ 0.65
TPM1-208ENST00000404484 ZNF891A8MT65 544 aaPredicted RBP19.13■□□□□ 0.65
TPM1-208ENST00000404484 SLC1A7O00341 560 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 KPNA4O00629 521 aaPredicted RBP19.13■□□□□ 0.65
TPM1-208ENST00000404484 CLPTM1O96005 669 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 CRHBPP24387 322 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 HLCSP50747 726 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 SNTA1Q13424 505 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 C12orf73Q69YU5 71 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 SLC27A4Q6P1M0 643 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 PCSK4Q6UW60 755 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 SLC43A2Q8N370 569 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 OR10G3Q8NGC4 313 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 RHOXF1Q8NHV9 184 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 CNIH3Q8TBE1 160 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 TMEM234Q8WY98 164 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 BBC3Q96PG8 261 aaPredicted RBP19.13■□□□□ 0.65
TPM1-208ENST00000404484 RASSF1Q9NS23 344 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 TBC1D23Q9NUY8 699 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 IL20Q9NYY1 176 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 TPRKBQ9Y3C4 175 aa19.13■□□□□ 0.65
TPM1-208ENST00000404484 ANKUB1A6NFN9 424 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 EFCAB9A8MZ26 197 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 RCBTB2O95199 551 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 PRKAR1AP10644 381 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 GIPRP48546 466 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 GINS1Q14691 196 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 TMEM236Q5W0B7 351 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 H3F3CQ6NXT2 135 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 PTCHD4Q6ZW05 846 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 MEX3DQ86XN8 651 aaKnown RBP19.12■□□□□ 0.65
TPM1-208ENST00000404484 KIF18BQ86Y91 864 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 TMEM156Q8N614 296 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 ADAM19Q9H013 955 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 MEPEQ9NQ76 525 aaPredicted RBP19.12■□□□□ 0.65
TPM1-208ENST00000404484 PPP4R1LQ9P1A2 415 aa19.12■□□□□ 0.65
TPM1-208ENST00000404484 IGLV3-32A0A0A0MS00 114 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 ADAM10O14672 748 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 SAGP10523 405 aaPredicted RBP19.11■□□□□ 0.65
TPM1-208ENST00000404484 EEF1B2P24534 225 aaKnown RBP19.11■□□□□ 0.65
TPM1-208ENST00000404484 HTR3AP46098 478 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 GAS1P54826 345 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 CDK5Q00535 292 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 CRYZQ08257 329 aaKnown RBP19.11■□□□□ 0.65
TPM1-208ENST00000404484 ATP1A1-AS1Q5TC04 95 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 OR52L1Q8NGH7 329 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 BRIX1Q8TDN6 353 aaKnown RBP19.11■□□□□ 0.65
TPM1-208ENST00000404484 GPR119Q8TDV5 335 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 ADAMTS17Q8TE56 1095 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 ST8SIA1Q92185 356 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 SGTBQ96EQ0 304 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 UBL7Q96S82 380 aaPredicted RBP19.11■□□□□ 0.65
TPM1-208ENST00000404484 DSN1Q9H410 356 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 C20orf141Q9NUB4 165 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 TAS2R10Q9NYW0 307 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 WIF1Q9Y5W5 379 aa19.11■□□□□ 0.65
TPM1-208ENST00000404484 ENO4A6NNW6 628 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 ERVH48-1M5A8F1 160 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 HCN1O60741 890 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SMNDC1O75940 238 aaKnown RBP eCLIP19.1■□□□□ 0.651e-8■■□□□ 11.9
TPM1-208ENST00000404484 IGFBP1P08833 259 aaPredicted RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 ATP6V1B1P15313 513 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 MAKP20794 623 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 TACR3P29371 465 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SNRPGP62308 76 aaKnown RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 ATP1A4Q13733 1029 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 QPRTQ15274 297 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SOWAHCQ53LP3 525 aaPredicted RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 SLC30A6Q6NXT4 461 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 GRINAQ7Z429 371 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 BPIFB6Q8NFQ5 453 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 OR8J1Q8NGP2 316 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 FANK1Q8TC84 345 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 EXTL1Q92935 676 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 Q96MT0 163 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SLC38A2Q96QD8 506 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 EGLN3Q9H6Z9 239 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 ATP13A2Q9NQ11 1180 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 HPF1Q9NWY4 346 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 ZNF226Q9NYT6 803 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SH3D21A4FU49 640 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 CDC42EP2O14613 210 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 WBP4O75554 376 aaKnown RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 BMP7P18075 431 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 PTNP21246 168 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 CXCR1P25024 350 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 MST1P26927 711 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SLC9A3P48764 834 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 POLR2HP52434 150 aaKnown RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 NR1H2P55055 460 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 TBR1Q16650 682 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 LINC00303Q3SY05 128 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 CRTC2Q53ET0 693 aaPredicted RBP19.1■□□□□ 0.65
TPM1-208ENST00000404484 LAIR2Q6ISS4 152 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 IL20RBQ6UXL0 311 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 GPALPP1Q8IXQ4 340 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 SGCZQ96LD1 299 aa19.1■□□□□ 0.65
TPM1-208ENST00000404484 FER1L6-AS2Q96M78 137 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms