RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZNF605Q86T29 641 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 NKAIN4Q8IVV8 208 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 GHDCQ8N2G8 530 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 C12orf10Q9HB07 376 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 LINC01387J3KSC0 135 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 PTNP21246 168 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 SELENBP1Q13228 472 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 NHSL2Q5HYW2 709 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 VASNQ6EMK4 673 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 C3orf33Q6P1S2 294 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 ARHGAP11AQ6P4F7 1023 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 PRSS27Q9BQR3 290 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 YY1AP1Q9H869 796 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 MAN2C1Q9NTJ4 1040 aa30.02■■■□□ 2.4
CSNK1E-204ENST00000403904 CFAP46Q8IYW2 2715 aa30.01■■■□□ 2.4
CSNK1E-204ENST00000403904 A0A087WUJ7 227 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 AQP7O14520 342 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 TIPRLO75663 272 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 ACTL6AO96019 429 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 THRBP10828 461 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 POU3F2P20265 443 aaPredicted RBP30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 RAC1P63000 192 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 SPIBQ01892 262 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 PIK3C3Q8NEB9 887 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 ARMC1Q9NVT9 282 aa30.01■■■□□ 2.39
CSNK1E-204ENST00000403904 H1F0P07305 194 aaKnown RBP30■■■□□ 2.39
CSNK1E-204ENST00000403904 SHC1P29353 583 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 RRM2P31350 389 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 SFTPDP35247 375 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 LHX2P50458 406 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 CRYZQ08257 329 aaKnown RBP30■■■□□ 2.39
CSNK1E-204ENST00000403904 LINC00114Q6XXX2 140 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 OR52J3Q8NH60 311 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 TIMP4Q99727 224 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 OR11A1Q9GZK7 315 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 AP4B1Q9Y6B7 739 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 SHANK1Q9Y566 2161 aa30■■■□□ 2.39
CSNK1E-204ENST00000403904 CHD6Q8TD26 2715 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 CST1P01037 141 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 CLDN20P56880 219 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 GTF3C1Q12789 2109 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 TRAM2Q15035 370 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 SOWAHCQ53LP3 525 aaPredicted RBP29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 P3H2Q8IVL5 708 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 C10orf67Q8IYJ2 551 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 UBQLNLQ8IYU4 475 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 MPP4Q96JB8 637 aa29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 SPIN1Q9Y657 262 aaPredicted RBP29.99■■■□□ 2.39
CSNK1E-204ENST00000403904 ZC3H12DA2A288 527 aaKnown RBP29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 NPIPA2E9PIF3 369 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 NPIPA3F8WFD2 350 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 TMEM176BQ3YBM2 270 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 OR2T5Q6IEZ7 315 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 FGD2Q7Z6J4 655 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 CHERPQ8IWX8 916 aaKnown RBP29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 OR2T29Q8NH02 315 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 TMEM255BQ8WV15 326 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 DNAJA3Q96EY1 480 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 H0YC42 278 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 SEC14L5O43304 696 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 TPD52P55327 224 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 SYT14P1Q58G82 188 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 DHRS1Q96LJ7 313 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 STOML1Q9UBI4 398 aa29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 RALYQ9UKM9 306 aaKnown RBP29.98■■■□□ 2.39
CSNK1E-204ENST00000403904 ZGRF1Q86YA3 2104 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 IGKV1D-42A0A075B6H8 117 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 A0A1W2PRQ8 180 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 ZNF208O43345 1280 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 GADD45GO95257 159 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 TFPIP10646 304 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 MAP2K6P52564 334 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 SUCLG1P53597 346 aaKnown RBP29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 CLDN18P56856 261 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 SRYQ05066 204 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 EGR4Q05215 589 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 DGCR6Q14129 220 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 C3AR1Q16581 482 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 FGD3Q5JSP0 725 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 ZFP1Q6P2D0 407 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 GFRALQ6UXV0 394 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 GGNQ86UU5 652 aa29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 SLC25A43Q8WUT9 341 aaPredicted RBP29.97■■■□□ 2.39
CSNK1E-204ENST00000403904 A8MVM7 634 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 H3BNX3 289 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 ADAMDEC1O15204 470 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 EDN3P14138 238 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 ZNF708P17019 499 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 ELF3P78545 371 aaPredicted RBP29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 PPP1R8Q12972 351 aaKnown RBP29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 SLC7A13Q8TCU3 470 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 STMN2Q93045 179 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 SARAFQ96BY9 339 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 DDIT4LQ96D03 193 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 ARL5BQ96KC2 179 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 ZNF426Q9BUY5 554 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 VNN3Q9NY84 501 aa29.96■■■□□ 2.39
CSNK1E-204ENST00000403904 HNRNPRO43390 633 aaKnown RBP29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 CLDN15P56746 228 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms