RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 RTN4RL1Q86UN2 441 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 LINC00052Q96N35 136 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 MS4A4EQ96PG1 132 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 KCND3Q9UK17 655 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 NEUROG3Q9Y4Z2 214 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 KDM4EB2RXH2 506 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 SGCEO43556 437 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 HMGA1P17096 107 aaKnown RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 HIST1H1TP22492 207 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 C21orf58P58505 322 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 DOCK1Q14185 1865 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GSG1Q2KHT4 349 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 WFIKKN2Q8TEU8 576 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GCDHQ92947 438 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 PDCD1LG2Q9BQ51 273 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 PRH1P02810 166 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 CHRM4P08173 479 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 HYAL4Q2M3T9 481 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 FAAP20Q6NZ36 180 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 DPPA4Q7L190 304 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 CPXM2Q8N436 756 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 MARCH5Q9NX47 278 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 MMP15P51511 669 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 BAMBIQ13145 260 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 HTR3DQ70Z44 454 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GPATCH2Q9NW75 528 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 A0A0D9SG52 128 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 A0A1B0GUH1 482 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 NPIPB8E9PQR5 432 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 LANCL1O43813 399 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CD160O95971 181 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 RAB28P51157 221 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 RNASE10Q5GAN6 216 aaKnown RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 ENPP7Q6UWV6 458 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 SORCS2Q96PQ0 1159 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TMPRSS11DO60235 418 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 LIPCP11150 499 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CTRB1P17538 263 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 S100A10P60903 97 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 LTBQ06643 244 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 NKPD1Q17RQ9 610 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 RAB11FIP2Q7L804 512 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 SIRT6Q8N6T7 355 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 PAQR8Q8TEZ7 354 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 THRSPQ92748 146 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF559Q9BR84 538 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CST11Q9H112 138 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 GSKIPQ9P0R6 139 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 COL11A1P12107 1806 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 NPC1O15118 1278 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 ADAMTS4O75173 837 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 WNT1P04628 370 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3HP0C7X1 549 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 OPRD1P41143 372 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CEBPGP53567 150 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CLDN2P57739 230 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TEAD2Q15562 447 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 NIPAL3Q6P499 406 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CMTM4Q8IZR5 234 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 SMIM4Q8WVI0 70 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 SCMH1Q96GD3 660 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 SLC38A3Q99624 504 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 GRHPRQ9UBQ7 328 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
HMGA2-204ENST00000403681 A0A0B4J293 547 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 PBX2P40425 430 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 GUCA1AP43080 201 aaPredicted RBP12.96□□□□□ -0.33
HMGA2-204ENST00000403681 OR3A2P47893 321 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 PGDP52209 483 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 RAG2P55895 527 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 ARHGAP19Q14CB8 494 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 RAB11BQ15907 218 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
HMGA2-204ENST00000403681 OR1J4Q8NGS1 313 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms