RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CCDC130P13994 396 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 POU2F1P14859 743 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIR2DS2P43631 304 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 GSSP48637 474 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 CCT3P49368 545 aaKnown RBP2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 EFNB2P52799 333 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 SEC61GP60059 68 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 NDPQ00604 133 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 EGFEM1PQ0D2K5 195 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 PLD1Q13393 1074 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 LRRC36Q1X8D7 754 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 KCTD21Q4G0X4 260 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 BEND3Q5T5X7 828 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR2G6Q5TZ20 316 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 Q6ZPB1 254 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 FAM220AQ7Z4H9 259 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 LYG1Q8N1E2 194 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR1L4Q8NGR5 311 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 NEIL2Q969S2 332 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 C10orf35Q96D05 121 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 RPRD1AQ96P16 312 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 RNF2Q99496 336 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 HYPKQ9NX55 129 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 DCAF16Q9NXF7 216 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 EXTL2Q9UBQ6 330 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 ABCG2Q9UNQ0 655 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 SMAD5-AS1Q9Y6J3 95 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 DDX49Q9Y6V7 483 aaKnown RBP2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 TTC21BQ7Z4L5 1316 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 CLSPNQ9HAW4 1339 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 E7ESA3 106 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 F5H6K3 240 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 POLR2DO15514 142 aaKnown RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 RAMP3O60896 148 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 SNX4O95219 450 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 LYPD3O95274 346 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 STAMBPO95630 424 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 AP2A1O95782 977 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 CAPN1P07384 714 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 HSMCR30P0CW71 290 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 NPR2P20594 1047 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZP3P21754 424 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 GNA11P29992 359 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 TDO2P48775 406 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 STX17P56962 302 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 KLRC3Q07444 240 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 LRRC74AQ0VAA2 488 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 KLRB1Q12918 225 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 NSUN5P1Q3KNT7 163 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 RABL6Q3YEC7 729 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 BCL7AQ4VC05 210 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 BOLA3Q53S33 107 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 SFT2D3Q587I9 215 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 PHYHD1Q5SRE7 291 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR2A2Q6IF42 318 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 ACOT7LQ6ZUV0 252 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 PGAP1Q75T13 922 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 NLRP9Q7RTR0 991 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 TGIF2LYQ8IUE0 185 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF584Q8IVC4 421 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 SVOPLQ8N434 492 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR52H1Q8NGJ2 320 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR52I1Q8NGK6 324 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 TCTEX1D2Q8WW35 142 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 FBXO32Q969P5 355 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 TUBGCP2Q9BSJ2 902 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 SRXN1Q9BYN0 137 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 ROPN1BQ9BZX4 212 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF385DQ9H6B1 395 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 RNF167Q9H6Y7 350 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 YY1AP1Q9H869 796 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 IL17CQ9P0M4 197 aa2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 PRPF19Q9UMS4 504 aaKnown RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 RPAP1Q9BWH6 1393 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P17-201ENST00000403495 CHD4Q14839 1912 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 TCRBV9S1A1TA0A576 114 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 EPOPA6NHQ4 379 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 GFYI3L273 518 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 DCTN6O00399 190 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 MED7O43513 233 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 FCMRO60667 390 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 LYPLA1O75608 230 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 SERF1AO75920 110 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 SCGNO76038 276 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 OXSR1O95747 527 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 TIMP1P01033 207 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGKV3-15P01624 115 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGHG4P01861 327 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 LGALS2P05162 132 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 RNH1P13489 461 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 CD1EP15812 388 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 GCFC2P16383 781 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 PSMB1P20618 241 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 ANXA13P27216 316 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 NMT1P30419 496 aaKnown RBP2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 NTSP30990 170 aa2.8□□□□□ -1.96
HMGB1P17-201ENST00000403495 PTGDSP41222 190 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms