RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CTHP32929 405 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 ARF3P61204 181 aaPredicted RBP23.57■■□□□ 1.36
COL13A1-203ENST00000398969 TP53I3Q53FA7 332 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 ARHGAP11AQ6P4F7 1023 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 OR11H7Q8NGC8 314 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 PTCHD1Q96NR3 888 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 ZFYVE21Q9BQ24 234 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF426Q9BUY5 554 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 SLC23A1Q9UHI7 598 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 NUBP2Q9Y5Y2 271 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 SPACA6W5XKT8 324 aa23.57■■□□□ 1.36
COL13A1-203ENST00000398969 CCDC85CA6NKD9 419 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 UBL3O95164 117 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 TCRBP04435 133 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 NGFRP08138 427 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 STOMP27105 288 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 HCCSP53701 268 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 TOMM5Q8N4H5 51 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 BMPERQ8N8U9 685 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 TMEM168Q9H0V1 697 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 BRWD1Q9NSI6 2320 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 A0A0B4J203 849 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 A0A1W2PPK0 400 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 OR6C74A6NCV1 312 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 NDUFB5O43674 189 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 HYAL3O43820 417 aaPredicted RBP23.56■■□□□ 1.36
COL13A1-203ENST00000398969 ADAM11O75078 769 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 IFNGP01579 166 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 TFP02787 698 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 HOXC4P09017 264 aaPredicted RBP23.56■■□□□ 1.36
COL13A1-203ENST00000398969 SNRPBP14678 240 aaKnown RBP23.56■■□□□ 1.36
COL13A1-203ENST00000398969 NFATC4Q14934 902 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 SYT9Q86SS6 491 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 SIAH3Q8IW03 269 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 ARL14Q8N4G2 192 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF614Q8N883 585 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 SMRP1Q8NCR6 262 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 OR4D9Q8NGE8 314 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 CITED4Q96RK1 184 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 POLE3Q9NRF9 147 aa23.56■■□□□ 1.36
COL13A1-203ENST00000398969 A6NCN8 305 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 MAGEB4O15481 346 aaPredicted RBP23.55■■□□□ 1.36
COL13A1-203ENST00000398969 SERPINA3P01011 423 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 MMP15P51511 669 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 DGCR2P98153 550 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 RNASE12Q5GAN4 147 aaKnown RBP23.55■■□□□ 1.36
COL13A1-203ENST00000398969 HAVCR2Q8TDQ0 301 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 THAP4Q8WY91 577 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 FAM3CQ92520 227 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 RERGQ96A58 199 aaPredicted RBP23.55■■□□□ 1.36
COL13A1-203ENST00000398969 SLCO1C1Q9NYB5 712 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 STMN3Q9NZ72 180 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 ABRACLQ9P1F3 81 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 ING4Q9UNL4 249 aa23.55■■□□□ 1.36
COL13A1-203ENST00000398969 OGG1O15527 345 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 EGFP01133 1207 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 EPXP11678 715 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ANGPT1Q15389 498 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 CEP78Q5JTW2 689 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 OR52E2Q8NGJ4 325 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 CTHRC1Q96CG8 243 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ZMYND19Q96E35 227 aaPredicted RBP23.54■■□□□ 1.36
COL13A1-203ENST00000398969 WDR92Q96MX6 357 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 SMAD5Q99717 465 aaKnown RBP23.54■■□□□ 1.36
COL13A1-203ENST00000398969 CAPN10Q9HC96 672 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 EMC7Q9NPA0 242 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 MRPL39Q9NYK5 338 aaKnown RBP23.54■■□□□ 1.36
COL13A1-203ENST00000398969 SERTAD3Q9UJW9 196 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 NKX2-2O95096 273 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 GDI2P50395 445 aaKnown RBP23.54■■□□□ 1.36
COL13A1-203ENST00000398969 EMDP50402 254 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 GPR18Q14330 331 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 SMIM19Q96E16 107 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 PELI1Q96FA3 418 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ZFP3Q96NJ6 502 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ERMAPQ96PL5 475 aaPredicted RBP23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ZCCHC4Q9H5U6 513 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 ZFP64Q9NPA5 681 aa23.54■■□□□ 1.36
COL13A1-203ENST00000398969 TEX13CA0A0J9YWL9 993 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 A0A1W2PQF6 199 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 PVRP15151 417 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 GIFP27352 417 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 RBM34P42696 430 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 ACAA2P42765 397 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 PITPNAQ00169 270 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 CDK5R1Q15078 307 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 ZC3H14Q6PJT7 736 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 SDR9C7Q8NEX9 313 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 OR51J1Q9H342 316 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 EVA1BQ9NVM1 165 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF222Q9UK12 451 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 EYSQ5T1H1 3165 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 FLRT2O43155 660 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 CBX7O95931 251 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 P2RX3P56373 397 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 CRYZQ08257 329 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF782Q6ZMW2 699 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 CA13Q8N1Q1 262 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms