RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ACVR1Q04771 509 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DGUOKQ16854 277 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 LRIF1Q5T3J3 769 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PLET1Q6UQ28 207 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MED25Q71SY5 747 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC22A16Q86VW1 577 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CACUL1Q86Y37 369 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DCUN1D3Q8IWE4 304 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4K15Q8NH41 348 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DTD2Q96FN9 168 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 C16orf58Q96GQ5 468 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC41A3Q96GZ6 507 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RNF170Q96K19 258 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SFXN2Q96NB2 322 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NAA50Q9GZZ1 169 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TUBB1Q9H4B7 451 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SCN3BQ9NY72 215 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SCN10AQ9Y5Y9 1956 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM265A0A087WTH1 108 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TCRBV16S1A1N1A0A5B0 115 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SIGLEC5O15389 551 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DFFBO76075 338 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 KDM4BO94953 1096 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SERPINA1P01009 418 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CFIP05156 583 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ALPLP05186 524 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 S100A11P31949 105 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 GPR12P47775 334 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 KCNJ3P48549 501 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TTPAP49638 278 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4D2P58180 307 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC7A9P82251 487 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PITPNAQ00169 270 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CTBSQ01459 385 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 UPP1Q16831 310 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PTPRNQ16849 979 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PTCHD3Q3KNS1 767 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 C6orf136Q5SQH8 315 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CST9LP1Q5W188 147 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 LYG2Q86SG7 212 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PEG10Q86TG7 708 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CCDC71LQ8N9Z2 235 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 OR7A2PQ8NGA2 310 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 OR10W1Q8NGF6 305 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RORBQ92753 470 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CDKN2AIPNLQ96HQ2 116 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 BTN2A3PQ96KV6 586 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RPL10LQ96L21 214 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM56Q96MV1 263 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NODALQ96S42 347 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF382Q96SR6 550 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 GPR21Q99679 349 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DDA1Q9BW61 102 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MAGT1Q9H0U3 335 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RHOFQ9HBH0 211 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SEMA5BQ9P283 1151 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ARL5AQ9Y689 179 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM56-RWDD3S4R434 201 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 FNDC1Q4ZHG4 1894 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NPEPPSL1A6NEC2 478 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 MYO1GB0I1T2 1018 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TRDCB7Z8K6 153 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR2J2O76002 312 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 KRT33AO76009 404 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 SCELO95171 688 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 RRASP10301 218 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NID1P14543 1247 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 MATN1P21941 496 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 CRHBPP24387 322 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LTBRP36941 435 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 GPNMBQ14956 572 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 C18orf21Q32NC0 220 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 C6orf141Q5SZD1 244 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF549Q6P9A3 640 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DPY19L2P2Q6ZN68 376 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF546Q86UE3 836 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TEX26Q8N6G2 289 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR13C4Q8NGS5 318 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC30A2Q9BRI3 323 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ELOVL1Q9BW60 279 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LHPPQ9H008 270 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TOR3AQ9H497 397 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 MTG2Q9H4K7 406 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM38AQ9H6F2 299 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NMNAT1Q9HAN9 279 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ZFYVE1Q9HBF4 777 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 IKZF3Q9UKT9 509 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TPRKBQ9Y3C4 175 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 GON4LQ3T8J9 2241 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 C9orf172C9J069 976 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LATS1O95835 1130 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HTR1AP08908 422 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HAPLN1P10915 354 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 CD247P20963 164 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 BRCC3P46736 316 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 MTPNP58546 118 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 IFI44LQ53G44 452 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms