RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TMEM9BQ9NQ34 198 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 OR8U9P0C7N5 309 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 WNT4P56705 351 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 EBF1Q9UH73 591 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 CDK2P24941 298 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SBSNQ6UWP8 590 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 MS4A15Q8N5U1 240 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 C1GALT1Q9NS00 363 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 KLHL42Q9P2K6 505 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 A6NIN4 97 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ALOX12BO75342 701 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 STK17BO94768 372 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 FCGR2AP12318 317 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 AQP2P41181 271 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 CX3CR1P49238 355 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 KCNJ10P78508 379 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 GPR155Q7Z3F1 870 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 C3orf49Q96BT1 292 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 BET1O15155 118 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 NCS1P62166 190 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF322Q6U7Q0 402 aaPredicted RBP10.57□□□□□ -0.72
TTC28-201ENST00000397906 LGALS12Q96DT0 336 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 RSPRY1Q96DX4 576 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 PHB2Q99623 299 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 RPH3ALQ9UNE2 315 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 BCL6P41182 706 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 BIDP55957 195 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 TRA2BP62995 288 aaKnown RBP10.57□□□□□ -0.72
TTC28-201ENST00000397906 CYS1Q717R9 158 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SLC39A13Q96H72 371 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 TMEM202A6NGA9 273 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 B4DXG7 233 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF587BE7ETH6 402 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 MAP2K3P46734 347 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 EFNA3P52797 238 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 IKZF1Q13422 519 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SCML4Q8N228 414 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF740Q8NDX6 193 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SNX18Q96RF0 628 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 NXT1Q9UKK6 140 aaKnown RBP10.57□□□□□ -0.72
TTC28-201ENST00000397906 PRRT4C9JH25 899 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 H7C2Y5 167 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF45Q02386 682 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF77Q15935 545 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 MRPL41Q8IXM3 137 aaKnown RBP10.57□□□□□ -0.72
TTC28-201ENST00000397906 TRIB1Q96RU8 372 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 WWTR1Q9GZV5 400 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 S100PP25815 95 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 IL2RGP31785 369 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 EDDM3BP56851 147 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 NDNFQ8TB73 568 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 C8orf44Q96CB5 159 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 ZNF300Q96RE9 604 aaPredicted RBP10.57□□□□□ -0.72
TTC28-201ENST00000397906 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 MUTYHQ9UIF7 546 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 IFNA17P01571 189 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 CAMLGP49069 296 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 DCAF7P61962 342 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 GAB1Q13480 694 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SGPP2Q8IWX5 399 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 SLC6A20Q9NP91 592 aa10.57□□□□□ -0.72
TTC28-201ENST00000397906 IGHV3-64DA0A0J9YX35 117 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 RAB27BO00194 218 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 IVDP26440 423 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 ADRA1AP35348 466 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 PPP5CP53041 499 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 GPR139Q6DWJ6 353 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 LCN8Q6JVE9 175 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 LCORQ96JN0 433 aaPredicted RBP10.56□□□□□ -0.72
TTC28-201ENST00000397906 AMDHD1Q96NU7 426 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 TUBA1CQ9BQE3 449 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 PTBP2Q9UKA9 531 aaKnown RBP10.56□□□□□ -0.72
TTC28-201ENST00000397906 HCRTR1O43613 425 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 PTGER4P35408 488 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 GLB1L2Q8IW92 636 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 UBXN10Q96LJ8 280 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 MICU1Q9BPX6 476 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 DENRO43583 198 aaKnown RBP10.56□□□□□ -0.72
TTC28-201ENST00000397906 RFC3P40938 356 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 COX15Q7KZN9 410 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 MKXQ8IYA7 352 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 B3GNT7Q8NFL0 401 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 HIPK2Q9H2X6 1198 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 SLC6A5Q9Y345 797 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 A0A1W2PQ09 198 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 HSD17B1P14061 328 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 TRNP1Q6NT89 227 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 YRDCQ86U90 279 aaKnown RBP10.56□□□□□ -0.72
TTC28-201ENST00000397906 OR5D18Q8NGL1 313 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 KATNB1Q9BVA0 655 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 POM121BA6NF01 834 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 SLC36A2Q495M3 483 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 ZNF684Q5T5D7 378 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 CPZQ66K79 652 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 TSPYL5Q86VY4 417 aaPredicted RBP10.56□□□□□ -0.72
TTC28-201ENST00000397906 FGF14Q92915 247 aa10.56□□□□□ -0.72
TTC28-201ENST00000397906 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms