RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PCDHGB5Q9Y5G0 923 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 IGFBP1P08833 259 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-203ENST00000397442 GSTM3P21266 225 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 CHMP24386 653 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 SLC25A53Q5H9E4 307 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 KIF18BQ86Y91 864 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 SPACA3Q8IXA5 215 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 MDS2Q8NDY4 140 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 ZNF555Q8NEP9 628 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 OR1J4Q8NGS1 313 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 GNRHR2Q96P88 292 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 RNF32Q9H0A6 362 aa24.94■■□□□ 1.58
CPNE1-203ENST00000397442 NDRG4Q9ULP0 352 aaKnown RBP24.94■■□□□ 1.58
CPNE1-203ENST00000397442 SLC25A12O75746 678 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 CEACAM4O75871 244 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 SOX14O95416 240 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 MYF6P23409 242 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 EIF2S3P41091 472 aaKnown RBP24.93■■□□□ 1.58
CPNE1-203ENST00000397442 HTR3AP46098 478 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 MASP1P48740 699 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 ZNF41P51814 821 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-203ENST00000397442 ESRRGP62508 458 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 CRYZQ08257 329 aaKnown RBP24.93■■□□□ 1.58
CPNE1-203ENST00000397442 GATA6Q92908 595 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 MUS81Q96NY9 551 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 PITX2Q99697 317 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 CCDC86Q9H6F5 360 aaKnown RBP24.93■■□□□ 1.58
CPNE1-203ENST00000397442 ENOPH1Q9UHY7 261 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 TMEM5Q9Y2B1 443 aa24.93■■□□□ 1.58
CPNE1-203ENST00000397442 TMED7-TICAM2A0A0A6YYA0 188 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 OR5H15A6NDH6 313 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 ENO4A6NNW6 628 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 FUT1P19526 365 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 CNR1P21554 472 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 CXCR1P25024 350 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 CRISP1P54107 249 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 GPR85P60893 370 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 ALDH6A1Q02252 535 aaKnown RBP24.92■■□□□ 1.58
CPNE1-203ENST00000397442 FOXF1Q12946 379 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 POMZP3Q6PJE2 187 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 POC1BQ8TC44 478 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 HRASLS5Q96KN8 279 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 HES7Q9BYE0 225 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 PTGES2Q9H7Z7 377 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 TMED7Q9Y3B3 224 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 PCDHGB6Q9Y5F9 930 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 ACACAQ13085 2346 aa24.92■■□□□ 1.58
CPNE1-203ENST00000397442 LRRC3CA6NJW4 275 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 BCKDKO14874 412 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 RASSF6Q6ZTQ3 369 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 HAS2Q92819 552 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 JSRP1Q96MG2 331 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-203ENST00000397442 TMEM72A0PK05 275 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 PINLYPA6NC86 204 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 IGF2P01344 180 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 CCNA2P20248 432 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 KEAP1Q14145 624 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 PDK3Q15120 406 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 PTGES3Q15185 160 aaKnown RBP24.91■■□□□ 1.58
CPNE1-203ENST00000397442 IGFL2Q6UWQ7 119 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 CCDC71Q8IV32 467 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-203ENST00000397442 MRGPRX4Q96LA9 322 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 PLA2G12AQ9BZM1 189 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 EGLN3Q9H6Z9 239 aa24.91■■□□□ 1.58
CPNE1-203ENST00000397442 TUBA8Q9NY65 449 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-203ENST00000397442 SHISA8B8ZZ34 492 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 SUSD5O60279 629 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 APOBEC1P41238 236 aaKnown RBP24.9■■□□□ 1.58
CPNE1-203ENST00000397442 FOXK1P85037 733 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 FOXO1Q12778 655 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 CCDC81Q6ZN84 652 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 CDK20Q8IZL9 346 aa24.9■■□□□ 1.58
CPNE1-203ENST00000397442 KTI12Q96EK9 354 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-203ENST00000397442 ZC3H12DA2A288 527 aaKnown RBP24.89■■□□□ 1.58
CPNE1-203ENST00000397442 ZAR1LA6NP61 321 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 EFNA2O43921 213 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 NPIPB7O75200 414 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 CBR3O75828 277 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 ZNF691Q5VV52 312 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 ZNF620Q6ZNG0 422 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 SLC46A3Q7Z3Q1 461 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 GMPPBQ9Y5P6 360 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 DMXL2Q8TDJ6 3036 aa24.89■■□□□ 1.58
CPNE1-203ENST00000397442 UNC119BA6NIH7 251 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 EFCAB9A8MZ26 197 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 LRRN3E7EW58 273 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 DPP4P27487 766 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 POU1F1P28069 291 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 DSCR4P56555 118 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-203ENST00000397442 FXYD6P3P58550 94 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 IL18R1Q13478 541 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 FHL1Q13642 323 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 TMEM236Q5W0B7 351 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 OR2M7Q8NG81 312 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 OR8D4Q8NGM9 314 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 SGTBQ96EQ0 304 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 FAM173AQ9BQD7 235 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 IL20Q9NYY1 176 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 NCKAP5O14513 1909 aa24.88■■□□□ 1.57
CPNE1-203ENST00000397442 A0A087WZY1 265 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms