RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ACER2Q5QJU3 275 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 B3GNTL1Q67FW5 361 aaPredicted RBP13.63□□□□□ -0.23
CAPN3-207ENST00000397200 INO80CQ6PI98 192 aaPredicted RBP13.63□□□□□ -0.23
CAPN3-207ENST00000397200 MBOAT2Q6ZWT7 520 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 SLC46A3Q7Z3Q1 461 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 CLDN22Q8N7P3 220 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 EFHD2Q96C19 240 aaPredicted RBP13.63□□□□□ -0.23
CAPN3-207ENST00000397200 SLC41A3Q96GZ6 507 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 PLGRKTQ9HBL7 147 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 FBXO34Q9NWN3 711 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 KCNMB2Q9Y691 235 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 ZFHX4Q86UP3 3567 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 EXPH5Q8NEV8 1989 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 IGF2RP11717 2491 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 CPAMD8Q8IZJ3 1885 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 A0A087WV48 116 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF354AO60765 605 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PPM1BO75688 479 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 LYPD3O95274 346 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PTHP01270 115 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 CD36P16671 472 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 GIPRP48546 466 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ENTPD1P49961 510 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 CCL11P51671 97 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 SMSP52788 366 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 MLLT10P55197 1068 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PLAURQ03405 335 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 FOXD4Q12950 439 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 MOGQ16653 247 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 TIGD6Q17RP2 521 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 MRPL2Q5T653 305 aaKnown RBP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ABHD17BQ5VST6 288 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 OPN5Q6U736 354 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF730Q6ZMV8 503 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PRICKLE2Q7Z3G6 844 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 RANBP3LQ86VV4 465 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 TMEM156Q8N614 296 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 DYNC2LI1Q8TCX1 351 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ASB15Q8WXK1 588 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ADOQ96SZ5 270 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
CAPN3-207ENST00000397200 ABI3Q9P2A4 366 aa13.62□□□□□ -0.23
CAPN3-207ENST00000397200 TSPAN2O60636 221 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 NAGAP17050 411 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 NR4A1P22736 598 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 SOX3P41225 446 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 PNLIPRP2P54317 469 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF91Q05481 1191 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 GINS1Q14691 196 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 GPR68Q15743 365 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 FLYWCH1Q4VC44 716 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 AGAP7PQ5VUJ5 663 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 ACSM5Q6NUN0 579 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 C19orf48Q6RUI8 117 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 ZAR1Q86SH2 424 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 GRAMD2AQ8IUY3 354 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 NKAIN4Q8IVV8 208 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 IQCF1Q8N6M8 205 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 TCEANCQ8N8B7 351 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 OR8D4Q8NGM9 314 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 AGAP4Q96P64 663 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 IL4I1Q96RQ9 567 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 ZBTB20Q9HC78 741 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 STMN3Q9NZ72 180 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 TESQ9UGI8 421 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 LSM2Q9Y333 95 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 RPL36Q9Y3U8 105 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 TRAPPC13A5PLN9 417 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 OR6C70A6NIJ9 312 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 PRKYO43930 277 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 FBXO45P0C2W1 286 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 DBTP11182 482 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 HTR2AP28223 471 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 LCN1P31025 176 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 UGT2B10P36537 528 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 HOXC5Q00444 222 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 EFR3AQ14156 821 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF829Q3KNS6 432 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 SYT14P1Q58G82 188 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 SLC27A4Q6P1M0 643 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 LYPD8Q6UX82 237 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 CROCCP3Q8IVE0 287 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 DND1Q8IYX4 353 aaKnown RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 BEST3Q8N1M1 668 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 TEX47Q8TBZ9 253 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 SLC35B4Q969S0 331 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 SPACA9Q96E40 222 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-207ENST00000397200 DACH2Q96NX9 599 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 RACGAP1Q9H0H5 632 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 OCEL1Q9H607 264 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 EGLN3Q9H6Z9 239 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 IL20Q9NYY1 176 aa13.61□□□□□ -0.23
CAPN3-207ENST00000397200 NPIPB9F8W1W9 429 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms