RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 FAM122AQ96E09 287 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 C1GALT1C1Q96EU7 318 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 ZNF552Q9H707 407 aaPredicted RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 NDRG4Q9ULP0 352 aaKnown RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 PCDHGB6Q9Y5F9 930 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 IGKV1D-42A0A075B6H8 117 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 UNC119BA6NIH7 251 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 EFCAB9A8MZ26 197 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 SLC25A12O75746 678 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 TP53P04637 393 aaPredicted RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 IGFBP1P08833 259 aaPredicted RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 ID4P47928 161 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 MFAP5Q13361 173 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 PLPPR5Q32ZL2 321 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 ZNF691Q5VV52 312 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 SETD9Q8NE22 299 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 SGTBQ96EQ0 304 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 PITX2Q99697 317 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 APOL4Q9BPW4 351 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 AKAP13Q12802 2813 aa18.52■□□□□ 0.56
VCPKMT-202ENST00000395860 SUSD5O60279 629 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 TRIM3O75382 744 aaPredicted RBP18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 CNR1P21554 472 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 APOBEC1P41238 236 aaKnown RBP18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 RPS6KA3P51812 740 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 DLX5P56178 289 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 GPR85P60893 370 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 FOXF1Q12946 379 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 TIGD3Q6B0B8 471 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 ADGRG3Q86Y34 549 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 KIF18BQ86Y91 864 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 MRGPRX4Q96LA9 322 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 GNRHR2Q96P88 292 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 NR1H4Q96RI1 486 aaPredicted RBP18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 EGLN3Q9H6Z9 239 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 PCDHGB5Q9Y5G0 923 aa18.52■□□□□ 0.55
VCPKMT-202ENST00000395860 A0A0G2JMM0 328 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 A0A1W2PPB8 328 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 A0A1W2PRS3 328 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 TMEM72A0PK05 275 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 OR5H15A6NDH6 313 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 KIR3DP1A8MWS1 328 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 E9PQ18 207 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 WISP1O95388 367 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 FUT1P19526 365 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 EGR4Q05215 589 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 TMEM236Q5W0B7 351 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 THAP5Q7Z6K1 395 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 FDCSPQ8NFU4 85 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 TEX47Q8TBZ9 253 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 NPAS1Q99742 590 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 CCDC86Q9H6F5 360 aaKnown RBP18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 KCNMB2Q9Y691 235 aa18.51■□□□□ 0.55
VCPKMT-202ENST00000395860 HTR3EA5X5Y0 456 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 ZAR1LA6NP61 321 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 ETV2O00321 342 aaPredicted RBP18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CBR3O75828 277 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 GGT2P36268 569 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 IL5RAQ01344 420 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC25A53Q5H9E4 307 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 RNF32Q9H0A6 362 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 DEPPQ9NTK1 212 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 A0A087WZY1 265 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CH25HO95992 272 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 IGF2P01344 180 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 TCEA1P23193 301 aaKnown RBP18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 DPP4P27487 766 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 DSCR4P56555 118 aaPredicted RBP18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 ARG2P78540 354 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 UGT2A3Q6UWM9 527 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CCDC81Q6ZN84 652 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF620Q6ZNG0 422 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 C10orf53Q8N6V4 93 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CLDN22Q8N7P3 220 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 OR13C2Q8NGS9 318 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 FANK1Q8TC84 345 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 OSTF1Q92882 214 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 ZBTB8AQ96BR9 441 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 PLA2G12AQ9BZM1 189 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 PNPLA3Q9NST1 481 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 TUBA8Q9NY65 449 aaPredicted RBP18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 IL20Q9NYY1 176 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 DKK4Q9UBT3 224 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CHRNA9Q9UGM1 479 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 DKKL1Q9UK85 242 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 CDH10Q9Y6N8 788 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 HSPE1-MOB4S4R3N1 261 aa18.5■□□□□ 0.55
VCPKMT-202ENST00000395860 A8MVM7 634 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 SHISA8B8ZZ34 492 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 EIF1P41567 113 aaKnown RBP18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 NUP107P57740 925 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 OAFQ86UD1 273 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 FAM81AQ8TBF8 368 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 HAS2Q92819 552 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 KTI12Q96EK9 354 aaPredicted RBP18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 FAM173AQ9BQD7 235 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 TBC1D23Q9NUY8 699 aa18.49■□□□□ 0.55
VCPKMT-202ENST00000395860 NCKAP5O14513 1909 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 LRRN3E7EW58 273 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 OR7A10O76100 309 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms