RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RPS6KB2Q9UBS0 482 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TESQ9UGI8 421 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CHRNA9Q9UGM1 479 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CD300AQ9UGN4 299 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MAGEL2Q9UJ55 1249 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 PRPF19Q9UMS4 504 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TRAPPC4Q9Y296 219 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SLC9A8Q9Y2E8 581 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 HDGFL3Q9Y3E1 203 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF175Q9Y473 711 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 FAM215AQ9Y5M1 114 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 HEATR5AQ86XA9 2040 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 NCKAP5O14513 1909 aa6.09□□□□□ -1.44
UBBP1-201ENST00000392399 MED12Q93074 2177 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SPTBN1Q01082 2364 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 PCNX1Q96RV3 2341 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 USP9YO00507 2555 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TMED7-TICAM2A0A0A6YYA0 188 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 A0A0J9YW62 118 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CLCA1A8K7I4 914 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 HSPB2A8KAH6 182 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SHISA8B8ZZ34 492 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 PYCARD-AS1I3L0S3 204 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 EIF1AYO14602 144 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 AP3D1O14617 1153 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ZNHIT1O43257 154 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SEC14L5O43304 696 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 EFNA2O43921 213 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SEMA7AO75326 666 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 RCBTB2O95199 551 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 LDLRP01130 860 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OPN1SWP03999 348 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CRHP06850 196 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 GLI4P10075 376 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 FCGR2AP12318 317 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 PRG2P13727 222 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 GGT1P19440 569 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CD247P20963 164 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TCEA1P23193 301 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TACR3P29371 465 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SLC7A1P30825 629 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CEACAM8P31997 349 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 IFNA8P32881 189 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 EIF1AXP47813 144 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SUCLG1P53597 346 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CRYBA2P53672 197 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CLDN15P56746 228 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 RAC3P60763 192 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CSNK2A1P68400 391 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 BNIP2Q12982 314 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 HSPB2Q16082 182 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TMEM176BQ3YBM2 270 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 DNAL1Q4LDG9 190 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 LRRC23Q53EV4 343 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CYBRD1Q53TN4 286 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SYT14P1Q58G82 188 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 HBMQ6B0K9 141 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF613Q6PF04 617 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 C5orf46Q6UWT4 87 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TMPPEQ6ZT21 453 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CBLL1Q75N03 491 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 UBQLNLQ8IYU4 475 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SLC43A2Q8N370 569 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CADM2Q8N3J6 435 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF808Q8N4W9 903 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 GPR32P1Q8NGA4 272 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OR10Q1Q8NGQ4 319 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OR10D3Q8NH80 312 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OR2V1Q8NHB1 315 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 STK35Q8TDR2 534 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SMPDL3BQ92485 455 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 FIG4Q92562 907 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OSTF1Q92882 214 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SLC38A4Q969I6 547 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CPNE4Q96A23 557 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF524Q96C55 264 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CCDC120Q96HB5 630 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ADGRG7Q96K78 797 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TRIB1Q96RU8 372 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 NPAS1Q99742 590 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 TUBA1CQ9BQE3 449 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 RSPO3Q9BXY4 272 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 POTEKPQ9BYX7 375 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 PCDHAC1Q9H158 963 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 RASSF4Q9H2L5 321 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 MUC13Q9H3R2 512 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 CTPS2Q9NRF8 586 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 GLRX2Q9NS18 164 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SELENONQ9NZV5 590 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF629Q9UEG4 869 aaPredicted RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SH3BGRL2Q9UJC5 107 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 OSGIN1Q9UJX0 560 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 MCTS1Q9ULC4 181 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SAMD4AQ9UPU9 718 aaKnown RBP6.08□□□□□ -1.44
UBBP1-201ENST00000392399 SH3GLB1Q9Y371 365 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms