RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 RANBP3LQ86VV4 465 aaPredicted RBP13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ADGRG3Q86Y34 549 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 TAMM41Q96BW9 452 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 INTS12Q96CB8 462 aaKnown RBP13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 DDIT4LQ96D03 193 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ALG2Q9H553 416 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 COQ10BQ9H8M1 238 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 RNF122Q9H9V4 155 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 KCNJ16Q9NPI9 418 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ARL8BQ9NVJ2 186 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 NDE1Q9NXR1 346 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ABCD2Q9UBJ2 740 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 RPS6KB2Q9UBS0 482 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 TMED7Q9Y3B3 224 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 HDGFL3Q9Y3E1 203 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 ICE1Q9Y2F5 2266 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 DOCK7Q96N67 2140 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 KIAA1549Q9HCM3 1950 aa13.49□□□□□ -0.25
IGHV3-53-201ENST00000390627 A0A1W2PNR3 127 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 NME4O00746 187 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 ZNF208O43345 1280 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 LGI1O95970 557 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 BMP5P22003 454 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 CXCR1P25024 350 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 RAC3P60763 192 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 CSNK2A1P68400 391 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 ZNF239Q16600 458 aaKnown RBP13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 DUSP7Q16829 419 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 GTF2IRD2BQ6EKJ0 949 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 GTF2IRD2Q86UP8 949 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 COMTD1Q86VU5 262 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 LIX1LQ8IVB5 337 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 GCNT2Q8N0V5 402 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 FITM2Q8N6M3 262 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 GPR32P1Q8NGA4 272 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 ZNF559Q9BR84 538 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 RSPO3Q9BXY4 272 aaPredicted RBP13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 SRXN1Q9BYN0 137 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 BAG5Q9UL15 447 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
IGHV3-53-201ENST00000390627 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 TMEM72A0PK05 275 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 AQP8O94778 261 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 PLGP00747 810 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 CCNA2P20248 432 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 CD247P20963 164 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 GSK3BP49841 420 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 MXRA7P84157 204 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 HOXC5Q00444 222 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 NRF1Q16656 503 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 C16orf89Q6UX73 402 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 TMPPEQ6ZT21 453 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 MCEMP1Q8IX19 187 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 PGAM4Q8N0Y7 254 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 RELL2Q8NC24 303 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 PROX1Q92786 737 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 C3orf49Q96BT1 292 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 ZHX1-C8orf76Q96EF9 292 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 ARHGDIGQ99819 225 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 KCTD14Q9BQ13 255 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 UCK2Q9BZX2 261 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 GLRX2Q9NS18 164 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 SELENONQ9NZV5 590 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 TMEM181Q9P2C4 612 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 SLC9A8Q9Y2E8 581 aa13.47□□□□□ -0.25
IGHV3-53-201ENST00000390627 CACNA1CQ13936 2221 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 A0A1W2PNV4 684 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 M0R3H8 397 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 SULT2B1O00204 365 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 GSTA4O15217 222 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 DNPH1O43598 174 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 FMO6PO60774 539 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 PMS2P2O95744 297 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 FESP07332 822 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 ENPP1P22413 925 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 HTR2AP28223 471 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 KDELR2P33947 212 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 DIO1P49895 249 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 ASCL1P50553 236 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 CRYBA2P53672 197 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 FOXF2Q12947 444 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 MYBPHQ13203 477 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 C6orf89Q6UWU4 347 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 ATG4DQ86TL0 474 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 SLC43A2Q8N370 569 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 RNF128Q8TEB7 428 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms