RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ANTXRLA6NF34 631 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 LIPCP11150 499 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 YPEL5P62699 121 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 ECH1Q13011 328 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 PODNL1Q6PEZ8 512 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 ALKAL2Q6UX46 152 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 ACVR1CQ8NER5 493 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 TM9SF4Q92544 642 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 P04436 131 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 GABRA5P31644 462 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CPOXP36551 454 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CD79BP40259 229 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 CAMK2DQ13557 499 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 FAM83HQ6ZRV2 1179 aaPredicted RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 PDZD3Q86UT5 571 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SAMD10Q9BYL1 202 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 FRS3O43559 492 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 TIMP2P16035 220 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 IL1RNP18510 177 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 RAB4AP20338 218 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 SLC6A8P48029 635 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 FIGLAQ6QHK4 219 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 PARS2Q7L3T8 475 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 NICN1Q9BSH3 213 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 OR52D1Q9H346 318 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 FADS1O60427 444 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 LTBQ06643 244 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 TMEM244Q5VVB8 128 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 LCTLQ6UWM7 567 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 TMEM102Q8N9M5 508 aaPredicted RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 OR4M1Q8NGD0 313 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 ARRDC2Q8TBH0 407 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 PEX11GQ96HA9 241 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 ABHD5Q8WTS1 349 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 BPIFA2Q96DR5 249 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 GABRR3A8MPY1 467 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 ZNF43P17038 809 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 GLO1Q04760 184 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 HMGN3Q15651 99 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 RTL6Q6ICC9 239 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 USP36Q9P275 1121 aaKnown RBP13.07□□□□□ -0.32
SNPH-201ENST00000381867 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
SNPH-201ENST00000381867 hCG_1807616A0A1W2PRN6 198 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 ARHGAP33O14559 1287 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 SMAD6O43541 496 aaKnown RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 FZD7O75084 574 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 RPP30P78346 268 aaKnown RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 EEF1A1P5Q5VTE0 462 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 NPRL2Q8WTW4 380 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 PSD2Q9BQI7 771 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 ZNF416Q9BWM5 594 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 SLC19A3Q9BZV2 496 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 TCEAL2Q9H3H9 227 aaPredicted RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 OR7A17O14581 309 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 SLC43A1O75387 559 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 PXNP49023 591 aaPredicted RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 KIR2DS3Q14952 304 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 BEX5Q5H9J7 111 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 KCNIP4Q6PIL6 250 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 IL20RBQ6UXL0 311 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 GAREM2Q75VX8 874 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 ZNF761Q86XN6 746 aaPredicted RBP13.06□□□□□ -0.32
SNPH-201ENST00000381867 LAX1Q8IWV1 398 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 NLGN4XQ8N0W4 816 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 OR51Q1Q8NH59 317 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 MYADMQ96S97 322 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 MROH6A6NGR9 719 aa13.06□□□□□ -0.32
SNPH-201ENST00000381867 E9PI62 339 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms