RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 CEP85LQ5SZL2 805 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 FRRS1Q6ZNA5 592 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 HEATR5AQ86XA9 2040 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 ZBTB18Q99592 522 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 QRSL1Q9H0R6 528 aaKnown RBP11.51□□□□□ -0.57
RPAIN-202ENST00000381208 CENPHQ9H3R5 247 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 FAIMQ9NVQ4 179 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-202ENST00000381208 TRAPPC4Q9Y296 219 aa11.51□□□□□ -0.57
RPAIN-202ENST00000381208 FREM1Q5H8C1 2179 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 FN1P02751 2386 aaKnown RBP11.5□□□□□ -0.57
RPAIN-202ENST00000381208 CADP27708 2225 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 CLOCKO15516 846 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 EIF1BO60739 113 aaKnown RBP11.5□□□□□ -0.57
RPAIN-202ENST00000381208 KRT75O95678 551 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 LY6G6DO95868 133 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 GGT1P19440 569 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 COX5AP20674 150 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 BGNP21810 368 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 PHC1P78364 1004 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 PPA1Q15181 289 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 MAPK14Q16539 360 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-202ENST00000381208 HHATQ5VTY9 493 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 ALKBH2Q6NS38 261 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 LRRC74BQ6ZQY2 392 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 RAB3IL1Q8TBN0 382 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 RAB8BQ92930 207 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 PANX1Q96RD7 426 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 C20orf27Q9GZN8 174 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 MTHFD2LQ9H903 347 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-202ENST00000381208 THAP1Q9NVV9 213 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 MGAT4BQ9UQ53 548 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 LAMP3Q9UQV4 416 aa11.5□□□□□ -0.57
RPAIN-202ENST00000381208 CENPVL1A0A0U1RR11 272 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 A0A1W2PP18 115 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 OVOL3O00110 214 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 HMGN4O00479 90 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 FAAHO00519 579 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 HDAC3O15379 428 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF208O43345 1280 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 PGM3O95394 542 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 PGRP06401 933 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 IDUAP35475 653 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 SLC16A1P53985 500 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 PPP2R2BQ00005 443 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 BST1Q10588 318 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ATG16L1Q676U5 607 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 RNF130Q86XS8 419 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF440Q8IYI8 595 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF75CPQ92670 426 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 APH1AQ96BI3 265 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 DDIT4LQ96D03 193 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 PAIP2Q9BPZ3 127 aaKnown RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 ALG2Q9H553 416 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 BARX1Q9HBU1 254 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 CTPS2Q9NRF8 586 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 AIG1Q9NVV5 245 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 PARPBPQ9NWS1 579 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 CALML5Q9NZT1 146 aa11.49□□□□□ -0.57
RPAIN-202ENST00000381208 NOSIPQ9Y314 301 aaKnown RBP11.49□□□□□ -0.57
RPAIN-202ENST00000381208 TRIM64A6NGJ6 449 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 TRIM64BA6NI03 449 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 SMAD7O15105 426 aaKnown RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 MRPL33O75394 65 aaKnown RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 LYZL6O75951 148 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 IL6P05231 212 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 DANCRP0C864 163 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 IDO1P14902 403 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 IL7RP16871 459 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 RYKP34925 604 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 POLR2HP52434 150 aaKnown RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 SLC18A1P54219 525 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 SLC35A1P78382 337 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 CHRNEQ04844 493 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 FUT5Q11128 374 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 TSC22D1Q15714 1073 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 STK11Q15831 433 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 GSTA3Q16772 222 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 OR7E24Q6IFN5 339 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 KLHL17Q6TDP4 642 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF621Q6ZSS3 439 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms