RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ENKD1Q9H0I2 346 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 DPEP2Q9H4A9 486 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 ALPK3Q96L96 1907 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 FCMRO60667 390 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 TBX6O95947 436 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 RLN2P04090 185 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ZNF806P0C7X5 589 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 MYOGP15173 224 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 CBR1P16152 277 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 HTR1FP30939 366 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 THBS2P35442 1172 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 CBX5P45973 191 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ANXA11P50995 505 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 ELAVL3Q14576 367 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 ZNF234Q14588 700 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 HAGHLQ6PII5 290 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 CMTM4Q8IZR5 234 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 BVESQ8NE79 360 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 OR5AR1Q8NGP9 310 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 RELTQ969Z4 430 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ZMYND19Q96E35 227 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 DMRTA2Q96SC8 542 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 NKX3-1Q99801 234 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 ZNF559Q9BR84 538 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ACTR6Q9GZN1 396 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 PLXND1Q9Y4D7 1925 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 KDM4EB2RXH2 506 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 SUSD5O60279 629 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 KCNJ13O60928 360 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 SEC61A1P61619 476 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 CCNJQ5T5M9 372 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 RNLSQ5VYX0 342 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ERN2Q76MJ5 926 aaKnown RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 C17orf64Q86WR6 236 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 SLC44A3Q8N4M1 653 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 TMEM185AQ8NFB2 350 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 OR52N1Q8NH53 320 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 OR8D1Q8WZ84 308 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 COX14Q96I36 57 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 UBQLN3Q9H347 655 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 GLIPR2Q9H4G4 154 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 GPN1Q9HCN4 374 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 GNG8Q9UK08 70 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 LIPT1Q9Y234 373 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 LOC100509620A0A075B734 347 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 TRAV27A0A087WT01 109 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 PRICKLE3O43900 615 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 LIPCP11150 499 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
SDC1-202ENST00000381150 FAM129CQ86XR2 697 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
SDC1-202ENST00000381150 FAM171A2A8MVW0 826 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 D6RAR5 112 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 NTSP30990 170 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 TMEM69Q5SWH9 247 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 YOD1Q5VVQ6 348 aaPredicted RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 ZCCHC12Q6PEW1 402 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 GRHL3Q8TE85 626 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 ZNF514Q96K75 400 aaPredicted RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 FKRPQ9H9S5 495 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 DEC1Q9P2X7 70 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 SLC23A2Q9UGH3 650 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 KIF26AQ9ULI4 1882 aaPredicted RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 NPIPA5A0A0B4J1W7 369 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 NPIPA7E9PJI5 369 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 G3V3Q6 166 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 B3GALNT1O75752 331 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 EPPINO95925 133 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 CSN2P05814 226 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 NPIPA8P0DM63 369 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 AGERQ15109 404 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 KHDRBS2Q5VWX1 349 aaKnown RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 RFLNBQ8N5W9 214 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 FANK1Q8TC84 345 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 SETD7Q8WTS6 366 aaKnown RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 ISYNA1Q9NPH2 558 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 SIRT3Q9NTG7 399 aaPredicted RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 POT1Q9NUX5 634 aa12.81□□□□□ -0.36
SDC1-202ENST00000381150 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 ZMAT5Q9UDW3 170 aaKnown RBP12.81□□□□□ -0.36
SDC1-202ENST00000381150 PRELID3BQ9Y3B1 194 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms