RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 HOXC5Q00444 222 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 KPNB1Q14974 876 aaKnown RBP17.42■□□□□ 0.38
GTF3A-201ENST00000381140 PON3Q15166 354 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 ZSWIM7Q19AV6 140 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 GLIPR1L2Q4G1C9 344 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 PDSS1Q5T2R2 415 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 ESPNLQ6ZVH7 1005 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 GRINAQ7Z429 371 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 SLC30A8Q8IWU4 369 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 GCNT2Q8N0V5 402 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 FAM156AQ8NDB6 213 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 SLC26A7Q8TE54 656 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 WNT2BQ93097 391 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 ZNF583Q96ND8 569 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 TM9SF2Q99805 663 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 KCTD14Q9BQ13 255 aaPredicted RBP17.42■□□□□ 0.38
GTF3A-201ENST00000381140 PRRG4Q9BZD6 226 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 UCK2Q9BZX2 261 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 SERINC1Q9NRX5 453 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 A0A1W2PNR3 127 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 MBD3L4A6NDZ8 208 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 MBD3L3A6NE82 208 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 MBD3L5A6NJ08 208 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 GJE1A6NN92 205 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 HSPB2A8KAH6 182 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 PRSS44E7EML9 344 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 M0QX08 132 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 TMIGD3P0DMS9 266 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 TCN1P20061 433 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 AGAP20933 346 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 TIMP3P35625 211 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 PCBP3P57721 371 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 COPZ1P61923 177 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 MS4A2Q01362 244 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 HSPB2Q16082 182 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 CTU2Q2VPK5 515 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 INTS11Q5TA45 600 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 C3orf33Q6P1S2 294 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 DHRS4L2Q6PKH6 230 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 ADGRE4PQ86SQ3 457 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 COMTD1Q86VU5 262 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 MBD3L2Q8NHZ7 208 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 FNDC9Q8TBE3 224 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 INTS12Q96CB8 462 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 DNAJA3Q96EY1 480 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 REXO5Q96IC2 774 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 OR5B2Q96R09 309 aa17.41■□□□□ 0.38
GTF3A-201ENST00000381140 RSPO3Q9BXY4 272 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 GMPR2Q9P2T1 348 aaKnown RBP17.41■□□□□ 0.38
GTF3A-201ENST00000381140 TMED7-TICAM2A0A0A6YYA0 188 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 NKX2-6A6NCS4 301 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ETV2O00321 342 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 MGRN1O60291 552 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 GCM2O75603 506 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 MFN2O95140 757 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 SYNGR4O95473 234 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 BMP5P22003 454 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 COL8A1P27658 744 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 TACR3P29371 465 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 CEACAM8P31997 349 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 APOBEC1P41238 236 aaKnown RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ACAA2P42765 397 aaKnown RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 CARD18P57730 90 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 RIPK1Q13546 671 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 FLOT2Q14254 428 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 HIST2H2BCQ6DN03 193 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ERICH5Q6P6B1 374 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 PATL1Q86TB9 770 aaKnown RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 LIX1LQ8IVB5 337 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 OR2T12Q8NG77 320 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 OSTF1Q92882 214 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 KLHL28Q9NXS3 571 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 TMED7Q9Y3B3 224 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ADAMDEC1O15204 470 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 MSX2P35548 267 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 SLC1A3P43003 542 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 POLR2HP52434 150 aaKnown RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ZNF136P52737 540 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 RGS8P57771 180 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 FOXF2Q12947 444 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 LILRB4Q8NHJ6 448 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 TAMM41Q96BW9 452 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ADGRG7Q96K78 797 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 UCN2Q96RP3 112 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 PCDHAC1Q9H158 963 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 ACTR3BQ9P1U1 418 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 CHRNA9Q9UGM1 479 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 MAGEL2Q9UJ55 1249 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 OSGIN1Q9UJX0 560 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 MCTS1Q9ULC4 181 aaKnown RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 SNX13Q9Y5W8 968 aa17.4■□□□□ 0.38
GTF3A-201ENST00000381140 SPIN1Q9Y657 262 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-201ENST00000381140 HECTD1Q9ULT8 2610 aa17.39■□□□□ 0.38
GTF3A-201ENST00000381140 FAAHO00519 579 aa17.39■□□□□ 0.37
GTF3A-201ENST00000381140 STAMBPO95630 424 aa17.39■□□□□ 0.37
GTF3A-201ENST00000381140 GRNP28799 593 aaKnown RBP17.39■□□□□ 0.37
GTF3A-201ENST00000381140 HTR3AP46098 478 aa17.39■□□□□ 0.37
GTF3A-201ENST00000381140 CCNIQ14094 377 aa17.39■□□□□ 0.37
GTF3A-201ENST00000381140 SYT14P1Q58G82 188 aa17.39■□□□□ 0.37
GTF3A-201ENST00000381140 WBP2NLQ6ICG8 309 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms