RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TPT1P13693 172 aaKnown RBP14.97□□□□□ -0.01
COL2A1-202ENST00000380518 RAB38P57729 211 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 RBM39Q14498 530 aaKnown RBP14.97□□□□□ -0.01
COL2A1-202ENST00000380518 C3orf38Q5JPI3 329 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 LCN10Q6JVE6 187 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 NIPAL3Q6P499 406 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 OPN5Q6U736 354 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 OR9K2Q8NGE7 335 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 RPL3LQ92901 407 aaKnown RBP14.97□□□□□ -0.01
COL2A1-202ENST00000380518 LRIT1Q9P2V4 623 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 KLK4Q9Y5K2 254 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 LTBQ06643 244 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 SPOCK1Q08629 439 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 TMEM201Q5SNT2 666 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 SULF2Q8IWU5 870 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 FAM160A2Q8N612 972 aaPredicted RBP14.97□□□□□ -0.01
COL2A1-202ENST00000380518 RHBDD1Q8TEB9 315 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 TP53TG5Q9Y2B4 290 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 ARHGAP33O14559 1287 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 EPHA1P21709 976 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 HLA-DMAP28067 261 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 CD6P30203 668 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 VASNQ6EMK4 673 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 TECPR1Q7Z6L1 1165 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 IL17RDQ8NFM7 739 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 OR6F1Q8NGZ6 308 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 TCTN2Q96GX1 697 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 CUTCQ9NTM9 273 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 TMEM100Q9NV29 134 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 PSORS1C1Q9UIG5 152 aa14.97□□□□□ -0.01
COL2A1-202ENST00000380518 SOCS7O14512 581 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 RPS5P46782 204 aaKnown RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 CXCL12P48061 93 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 TM4SF4P48230 202 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 NR0B2Q15466 257 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 AGAP7PQ5VUJ5 663 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 ZNF585AQ6P3V2 769 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 STEAP2Q8NFT2 490 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 HRASLS5Q96KN8 279 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 KCNK5O95279 499 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 SEMA3BQ13214 749 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 ZNF169Q14929 603 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 MEX3BQ6ZN04 569 aaKnown RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 BEST4Q8NFU0 473 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 OR5T1Q8NG75 326 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 C22orf15Q8WYQ4 148 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 SENP5Q96HI0 755 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 IL37Q9NZH6 218 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 RCE1Q9Y256 329 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 KDM4EB2RXH2 506 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 PKLRP30613 574 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 SLC1A3P43003 542 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 ILKQ13418 452 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 MBTPS1Q14703 1052 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 PTRH1Q86Y79 214 aaKnown RBP14.96□□□□□ -0.01
COL2A1-202ENST00000380518 MKXQ8IYA7 352 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 MMP21Q8N119 569 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 OR7G1Q8NGA0 311 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 OR51Q1Q8NH59 317 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 RSC1A1Q92681 617 aa14.96□□□□□ -0.01
COL2A1-202ENST00000380518 TRBV11-1A0A0K0K1C0 115 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 F13BP05160 661 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 CHRM4P08173 479 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 POU3F2P20265 443 aaPredicted RBP14.96□□□□□ -0.02
COL2A1-202ENST00000380518 GABRR1P24046 479 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 SEC61A1P61619 476 aaKnown RBP14.96□□□□□ -0.02
COL2A1-202ENST00000380518 PLK5Q496M5 336 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 FAM78AQ5JUQ0 283 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 LMNTD1Q8N9Z9 388 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 TMEM185AQ8NFB2 350 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 ISL2Q96A47 359 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 SORCS2Q96PQ0 1159 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 MS4A8Q9BY19 250 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 KCNJ16Q9NPI9 418 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 CD300AQ9UGN4 299 aa14.96□□□□□ -0.02
COL2A1-202ENST00000380518 TRIM64BA6NI03 449 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 CD300LBA8K4G0 201 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 ACOT8O14734 319 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 F11P03951 625 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 KLKB1P03952 638 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 PCBD1P61457 104 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 FCRLAQ7L513 359 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 PPP1R3BQ86XI6 285 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 PRR18Q8N4B5 295 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 RLN3Q8WXF3 142 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 ULBP2Q9BZM5 246 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 ENKD1Q9H0I2 346 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 SAV1Q9H4B6 383 aaPredicted RBP14.95□□□□□ -0.02
COL2A1-202ENST00000380518 B3GNT2Q9NY97 397 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 ALDH3B1P43353 468 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 MAVSQ7Z434 540 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 POC1BQ8TC44 478 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 PAPOLGQ9BWT3 736 aaKnown RBP14.95□□□□□ -0.02
COL2A1-202ENST00000380518 CDC14CA4D256 554 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 B4DXG7 233 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 SYT5O00445 386 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 CACNG3O60359 315 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 DBHP09172 617 aa14.95□□□□□ -0.02
COL2A1-202ENST00000380518 ZNF26P17031 533 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms