RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 EXOGQ9Y2C4 368 aaKnown RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 SF3B6Q9Y3B4 125 aaKnown RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 PEX16Q9Y5Y5 336 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 PTP4A3O75365 173 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 CDRT1O95170 752 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 CLEC2LP0C7M8 214 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 ARL4DP49703 201 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 AP2S1P53680 142 aaPredicted RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 CAMKK1Q8N5S9 505 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 TRIM2Q9C040 744 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 CPNE5Q9HCH3 593 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 ERVK13-1Q9NX77 482 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 TNFRSF10DQ9UBN6 386 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 NUP50Q9UKX7 468 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 TMEM5Q9Y2B1 443 aa13.66□□□□□ -0.22
PRNP-201ENST00000379440 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
PRNP-201ENST00000379440 CSTAP01040 98 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 EPHA4P54764 986 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 HSD11B2P80365 405 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 TPBGQ13641 420 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 DSG2Q14126 1118 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 KLHL12Q53G59 568 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 NIPAL3Q6P499 406 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 OAFQ86UD1 273 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 OR1L3Q8NH93 324 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 ZNF426Q9BUY5 554 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 UNC13CQ8NB66 2214 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 SEC16AO15027 2179 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 A0A1W2PQ72 361 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 SMIM30A4D0T7 59 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 K7ESF4 209 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 UPK1BO75841 260 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 PPP1R3DO95685 299 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 GUSBP08236 651 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 FOLR1P15328 257 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 CSF2RBP32927 897 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 AFF3P51826 1226 aaKnown RBP13.65□□□□□ -0.22
PRNP-201ENST00000379440 EFNA3P52797 238 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 CDC20Q12834 499 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 SNTA1Q13424 505 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 SERTAD2Q14140 314 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 TMEM44Q2T9K0 475 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 PLK5Q496M5 336 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 CRTC2Q53ET0 693 aaPredicted RBP13.65□□□□□ -0.22
PRNP-201ENST00000379440 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 SPRYD4Q8WW59 207 aaPredicted RBP13.65□□□□□ -0.22
PRNP-201ENST00000379440 DNASE2BQ8WZ79 361 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 UFD1Q92890 307 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 TBX5Q99593 518 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 LRRN3Q9H3W5 708 aa13.65□□□□□ -0.22
PRNP-201ENST00000379440 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 SERINC4A6NH21 518 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 AGRPO00253 132 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 IGHA1P01876 353 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 GIMD1P0DJR0 217 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 CLUP10909 449 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 NOS3P29474 1203 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 CXCL12P48061 93 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 FHL1Q13642 323 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 MED25Q71SY5 747 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 Q7L0L9 218 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 MEPCEQ7L2J0 689 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 ZNF550Q7Z398 422 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 SLC22A16Q86VW1 577 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 ZNF578Q96N58 590 aaPredicted RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 OR8D2Q9GZM6 311 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 CHRNA10Q9GZZ6 450 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 OR51V1Q9H2C8 321 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 ISG20L2Q9H9L3 353 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 ZNF229Q9UJW7 825 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 FBXL4Q9UKA2 621 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 EML5Q05BV3 1969 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 NUDT21O43809 227 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 HCN1O60741 890 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 REM1O75628 298 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 RORCP51449 518 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 SLC16A1P53985 500 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 MRPS15P82914 257 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 FABP5Q01469 135 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 ZNF45Q02386 682 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 VWA2Q5GFL6 755 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 RSBN1Q5VWQ0 802 aaPredicted RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 ULK3Q6PHR2 472 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 TSSK4Q6SA08 328 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 LINC00114Q6XXX2 140 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 PRSS58Q8IYP2 241 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 LRRC17Q8N6Y2 441 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms