RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 F8W036 122 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 KHNYNO15037 678 aaKnown RBP9.99□□□□□ -0.81
NEDD9-201ENST00000379433 RGS5O15539 181 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 STX11O75558 287 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 HOXC4P09017 264 aaPredicted RBP9.99□□□□□ -0.81
NEDD9-201ENST00000379433 ADORA3P0DMS8 318 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 OPRL1P41146 370 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 GIPRP48546 466 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 HNRNPKP61978 463 aaKnown RBP eCLIP9.99□□□□□ -0.812e-6■□□□□ 10.5
NEDD9-201ENST00000379433 DOC2BQ14184 412 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 LCN1P1Q5VSP4 162 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 PRSS48Q7RTY5 328 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 KIF18BQ86Y91 864 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 SLC30A8Q8IWU4 369 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 BBS1Q8NFJ9 593 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 OR51Q1Q8NH59 317 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 PRR7Q8TB68 274 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 PIGKQ92643 395 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 SAMD8Q96LT4 415 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 PRRC1Q96M27 445 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 DGAT2Q96PD7 388 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 KCNS3Q9BQ31 491 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 NUDT22Q9BRQ3 303 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 SIT1Q9Y3P8 196 aa9.99□□□□□ -0.81
NEDD9-201ENST00000379433 CDC42EP2O14613 210 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 BCAT2O15382 392 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ADAP00813 363 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 IFI30P13284 250 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 CAPZBP47756 277 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 FZD5Q13467 585 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 CTF1Q16619 201 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 RGS21Q2M5E4 152 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF770Q6IQ21 691 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 GDF7Q7Z4P5 450 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 THNSL2Q86YJ6 484 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 TBC1D15Q8TC07 691 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 NT5CQ8TCD5 201 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 CHAC2Q8WUX2 184 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 GATAD2BQ8WXI9 593 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 POP5Q969H6 163 aaKnown RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 TRNT1Q96Q11 434 aaKnown RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 VRK1Q99986 396 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 DPYSL5Q9BPU6 564 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SMOC1Q9H4F8 434 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SLC2A4RGQ9NR83 387 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 MGAT4BQ9UQ53 548 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 A0A1W2PPL8 197 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 GDF9O60383 454 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 PTP4A3O75365 173 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 NME1P15531 152 aaKnown RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ITIH1P19827 911 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SOX18P35713 384 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SERPINB10P48595 397 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 GABARAPL2P60520 117 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ST3GAL3Q11203 375 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 FAM53BQ14153 422 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 NIPAL1Q6NVV3 410 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 C16orf47Q6ZP98 133 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 RABEPKQ7Z6M1 372 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 FJX1Q86VR8 437 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 TIGD4Q8IY51 512 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 OR8D4Q8NGM9 314 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 PSMA8Q8TAA3 256 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ANKRD9Q96BM1 317 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SGCZQ96LD1 299 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 NECAB3Q96P71 396 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ITPAQ9BY32 194 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 SAP130Q9H0E3 1048 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ENKD1Q9H0I2 346 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 MTHFD2LQ9H903 347 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 FTSJ1Q9UET6 329 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 ENPP5Q9UJA9 477 aa9.98□□□□□ -0.81
NEDD9-201ENST00000379433 C19orf53Q9UNZ5 99 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-201ENST00000379433 A0A1W2PPH5 198 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZAR1LA6NP61 321 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CLDN4O14493 209 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 TNFSF14O43557 240 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 FOXS1O43638 330 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 NUDT14O95848 222 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 THY1P04216 161 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CDK1P06493 297 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 RNH1P13489 461 aaKnown RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 TMBIM6P55061 237 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZNHIT3Q15649 155 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 PRICKLE4Q2TBC4 344 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF628Q5EBL2 1059 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 OR5M10Q6IEU7 315 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 C1orf94Q6P1W5 598 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 RTL4Q6ZR62 310 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 OR2L13Q8N349 312 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 OR4F15Q8NGB8 312 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 NANPQ8TBE9 248 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 PIGXQ8TBF5 258 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 FKBP10Q96AY3 582 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 MGLLQ99685 303 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 POLR2J2Q9GZM3 115 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms