RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 GON7Q9BXV9 100 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 NDEL1Q9GZM8 345 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 MTIF3Q9H2K0 278 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 TCEAL2Q9H3H9 227 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 FOLH1BQ9HBA9 442 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 FAM60AQ9NP50 221 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 RPRD1BQ9NQG5 326 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 POLE3Q9NRF9 147 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 C14orf105Q9NVL8 296 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CPNE7Q9UBL6 633 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CHRNA9Q9UGM1 479 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SERTAD3Q9UJW9 196 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 DTX4Q9Y2E6 619 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 A0A0A6YYJ9 748 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 A0A1W2PRG6 482 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ZNF780AO75290 641 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 RDH16O75452 317 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 HIST1H1CP16403 213 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 ATF1P18846 271 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 VSX2P58304 361 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 TAS2R43P59537 309 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 RPS11P62280 158 aaKnown RBP eCLIP10.06□□□□□ -0.8
BEST1-201ENST00000378043 TP53I3Q53FA7 332 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ALG10BQ5I7T1 473 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ZNF761Q86XN6 746 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 LRRC17Q8N6Y2 441 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 LSMEM1Q8N8F7 131 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 TEX19Q8NA77 164 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SDR9C7Q8NEX9 313 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 OR52E2Q8NGJ4 325 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 OR4K13Q8NH42 304 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 PELI1Q96FA3 418 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 KLHL1Q9NR64 748 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 HRASLS2Q9NWW9 162 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 FBXL21Q9UKT6 434 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SPACA6W5XKT8 324 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 C2orf74A8MZ97 194 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 LRRN3E7EW58 273 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ERVH48-1M5A8F1 160 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 IMPA2O14732 288 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 FOXS1O43638 330 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ALX3O95076 343 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CELA2BP08218 269 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 IFI6P09912 130 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SLC35E2P0CK97 266 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CTHP32929 405 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SNRPD2P62316 118 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 BTG1P62324 171 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CRYZQ08257 329 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 KIRREL2Q6UWL6 708 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ARHGEF39Q8N4T4 335 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 OR9A4Q8NGU2 314 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 AKAP1Q92667 903 aaKnown RBP eCLIP10.06□□□□□ -0.8
BEST1-201ENST00000378043 GAS2L1Q99501 681 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 TRAF4Q9BUZ4 470 aaPredicted RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 GTPBP2Q9BX10 602 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 RBCK1Q9BYM8 510 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.06□□□□□ -0.8
BEST1-201ENST00000378043 LRRN3Q9H3W5 708 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 FBRSQ9HAH7 460 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ICAM5Q9UMF0 924 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SCML1Q9UN30 329 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 BAIAP2Q9UQB8 552 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CACNG2Q9Y698 323 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 GNB5O14775 395 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 OGG1O15527 345 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 RAB3BP20337 219 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 SLC6A6P31641 620 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 RBM34P42696 430 aaKnown RBP10.05□□□□□ -0.8
BEST1-201ENST00000378043 UBE2IP63279 158 aaKnown RBP10.05□□□□□ -0.8
BEST1-201ENST00000378043 GPLD1P80108 840 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 MANEAQ5SRI9 462 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 BCL2L15Q5TBC7 163 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 ARHGAP11AQ6P4F7 1023 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 PLCZ1Q86YW0 608 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 SLC22A18ASQ8N1D0 253 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 CADM2Q8N3J6 435 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 MS4A15Q8N5U1 240 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 YIPF5Q969M3 257 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 ZCCHC4Q9H5U6 513 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 CLEC4AQ9UMR7 237 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 NCKAP1Q9Y2A7 1128 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 ADAM18Q9Y3Q7 739 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 NPFFR2Q9Y5X5 522 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 CACNA1IQ9P0X4 2223 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 A0A0J9YY10 115 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 CD3GP09693 182 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 EPXP11678 715 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 SNRPBP14678 240 aaKnown RBP10.05□□□□□ -0.8
BEST1-201ENST00000378043 TPMTP51580 245 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 ACTC1P68032 377 aa10.05□□□□□ -0.8
BEST1-201ENST00000378043 ACTA1P68133 377 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms