RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SPTBP11277 2137 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 A0A1W2PPL8 197 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 CARNS1A5YM72 827 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 ADAM11O75078 769 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 LDB3O75112 727 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 PEX14O75381 377 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 RCBTB2O95199 551 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 ADH1CP00326 375 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 NGFRP08138 427 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 LAMP2P13473 410 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 POU3F2P20265 443 aaPredicted RBP16.61■□□□□ 0.25
GNE-201ENST00000377902 RAD52P43351 418 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 TCTE1Q5JU00 501 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 HACD4Q5VWC8 232 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 OR52E2Q8NGJ4 325 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 FKRPQ9H9S5 495 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 HRASLSQ9HDD0 168 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 POT1Q9NUX5 634 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 TBX21Q9UL17 535 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 SPATA2Q9UM82 520 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 STON1Q9Y6Q2 735 aa16.61■□□□□ 0.25
GNE-201ENST00000377902 TRBV23OR9-2A0A075B6M9 112 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TBC1D3KA0A087X1G2 549 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TBC1D3BA6NDS4 549 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TBC1D3FA6NER0 549 aaPredicted RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 ARPC1BO15143 372 aaKnown RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 UGT2B7P16662 529 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 CCR9P51686 369 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TRAM1Q15629 374 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TBC1D3GQ6DHY5 549 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 FGD2Q7Z6J4 655 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 SMIM4Q8WVI0 70 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 SUSD6Q92537 303 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 GFI1Q99684 422 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TEX101Q9BY14 249 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 INPP5EQ9NRR6 644 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 PCDHGA9Q9Y5G4 932 aaKnown RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 CHD9Q3L8U1 2897 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 ACOD1A6NK06 481 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 CXCL2P19875 107 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TAS2R43P59537 309 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 RPS15P62841 145 aaKnown RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 IKZF1Q13422 519 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 DCST2Q5T1A1 773 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 SLC25A25Q6KCM7 469 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 OR2L13Q8N349 312 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 ZNF433Q8N7K0 673 aaPredicted RBP16.6■□□□□ 0.25
GNE-201ENST00000377902 MFSD9Q8NBP5 474 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 GSX2Q9BZM3 304 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 PTTG3PQ9NZH4 202 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 GNG8Q9UK08 70 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 MED31Q9Y3C7 131 aa16.6■□□□□ 0.25
GNE-201ENST00000377902 TRBV2A0A0J9YWF9 115 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ANKRD61A6NGH8 418 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 TSPAN4O14817 238 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 PTP4A3O75365 173 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ZNF3P17036 446 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 CD53P19397 219 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 RUNX2Q13950 521 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 EXOSC7Q15024 291 aaKnown RBP16.59■□□□□ 0.25
GNE-201ENST00000377902 RPE65Q16518 533 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 SLC22A10Q63ZE4 541 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 CMIPQ8IY22 773 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 CDK20Q8IZL9 346 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 HDDC3Q8N4P3 179 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 TOR1AIP2Q8NFQ8 470 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 GPR174Q9BXC1 333 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ABRACLQ9P1F3 81 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 HCN3Q9P1Z3 774 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 TRAV1-2A0A0B4J238 106 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 POM121CA8CG34 1229 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 PIN1P1O15428 100 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ATF4P18848 351 aaPredicted RBP16.59■□□□□ 0.25
GNE-201ENST00000377902 ANXA7P20073 488 aaKnown RBP16.59■□□□□ 0.25
GNE-201ENST00000377902 GRPRP30550 384 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 PTGS2P35354 604 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 MAP2K6P52564 334 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 RAB14P61106 215 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 CDK5R1Q15078 307 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 AMZ1Q400G9 498 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 GXYLT1Q4G148 440 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 SFRP5Q5T4F7 317 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 APOOLQ6UXV4 268 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 TMPRSS11FQ6ZWK6 438 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ZNF619Q8N2I2 560 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 OR4K14Q8NGD5 310 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 RBPMSQ93062 196 aaKnown RBP16.59■□□□□ 0.25
GNE-201ENST00000377902 SMIM19Q96E16 107 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 ERMAPQ96PL5 475 aaPredicted RBP16.59■□□□□ 0.25
GNE-201ENST00000377902 ZNF350Q9GZX5 532 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 NOX4Q9NPH5 578 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 MAB21L2Q9Y586 359 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 NPTNQ9Y639 398 aa16.59■□□□□ 0.25
GNE-201ENST00000377902 GXYLT2A0PJZ3 443 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 EML2O95834 649 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 NID1P14543 1247 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 HIST1H1CP16403 213 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms