RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SELENOFO60613 162 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 HNRNPA2B1P22626 353 aaKnown RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 DGCR2P98153 550 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 DLX2Q07687 328 aaPredicted RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 FAPQ12884 760 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 PON3Q15166 354 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SF3A2Q15428 464 aaKnown RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 SHHQ15465 462 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 RTL4Q6ZR62 310 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 ERVK-19Q9WJR5 959 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SLC35A3Q9Y2D2 325 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 NOTOA8MTQ0 251 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 FABP7O15540 132 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ADAM11O75078 769 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 F13BP05160 661 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ITPKBP27987 946 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SLC6A6P31641 620 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 GDI2P50395 445 aaKnown RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 LBX1P52954 281 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 FAM53BQ14153 422 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 BCL2A1Q16548 175 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 CEP78Q5JTW2 689 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 AKAP1Q92667 903 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP11-204ENST00000377107 FLRT3Q9NZU0 649 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SIGLEC7Q9Y286 467 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 DTX4Q9Y2E6 619 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ARID1AO14497 2285 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 TVP23AA6NH52 213 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SLC19A2O60779 497 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 HLA-DQA2P01906 255 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SSTR2P30874 369 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 AKT2P31751 481 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 TPMTP51580 245 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 GBX2P52951 348 aaPredicted RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 HHEXQ03014 270 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ENPP2Q13822 863 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 GALEQ14376 348 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 SLC25A30Q5SVS4 291 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 FAAH2Q6GMR7 532 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 USP53Q70EK8 1073 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 PHOSPHO1Q8TCT1 267 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 NR4A3Q92570 626 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 LMF1Q96S06 567 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 CACNG6Q9BXT2 260 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ZNF350Q9GZX5 532 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 PNO1Q9NRX1 252 aaKnown RBP11.93□□□□□ -0.5
USP11-204ENST00000377107 ACOXLQ9NUZ1 547 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 ASB6Q9NWX5 421 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 NPAP1Q9NZP6 1156 aa11.93□□□□□ -0.5
USP11-204ENST00000377107 EPOPA6NHQ4 379 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 MCIDASD6RGH6 385 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 MEN1O00255 615 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 FLRT2O43155 660 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 VASNQ6EMK4 673 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 PHOSPHO2Q8TCD6 241 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 DERL3Q96Q80 235 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 MKKSQ9NPJ1 570 aaPredicted RBP11.92□□□□□ -0.5
USP11-204ENST00000377107 CMC2Q9NRP2 79 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 COL4A3Q01955 1670 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 A0A1W2PQF6 199 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 BHLHE40O14503 412 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 CTHP32929 405 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 AGFG1P52594 562 aaKnown RBP11.92□□□□□ -0.5
USP11-204ENST00000377107 MAZP56270 477 aaKnown RBP11.92□□□□□ -0.5
USP11-204ENST00000377107 PRAMEF8Q5VWM4 474 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 PRAMEF7Q5VXH5 474 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 TPSD1Q9BZJ3 242 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 TRANK1O15050 2925 aa11.92□□□□□ -0.5
USP11-204ENST00000377107 FBXO45P0C2W1 286 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 RRAS2P62070 204 aaPredicted RBP11.91□□□□□ -0.5
USP11-204ENST00000377107 HEPHL1Q6MZM0 1159 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 KIRREL2Q6UWL6 708 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 LUZP2Q86TE4 346 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 LNX2Q8N448 690 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 OR4C3Q8NH37 302 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 ELF4Q99607 663 aaPredicted RBP11.91□□□□□ -0.5
USP11-204ENST00000377107 OR8D2Q9GZM6 311 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 ANKRD19PQ9H560 264 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 MED17Q9NVC6 651 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 SPATA2Q9UM82 520 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 CACNG2Q9Y698 323 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 TEX13CA0A0J9YWL9 993 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 TNFP01375 233 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 IL9P15248 144 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 ZNF24P17028 368 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 FAAP20Q6NZ36 180 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 SIAH3Q8IW03 269 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 OR8H3Q8N146 312 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 ZNF563Q8TA94 476 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 FGF11Q92914 225 aa11.91□□□□□ -0.5
USP11-204ENST00000377107 ZNF764Q96H86 408 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms