RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SIMC1Q8NDZ2 872 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 OR2T27Q8NH04 317 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 OR51A7Q8NH64 312 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CNOT9Q92600 299 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 ZNF486Q96H40 463 aaPredicted RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 VSTM2LQ96N03 204 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CNN2Q99439 309 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 SOSTQ9BQB4 213 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 LRRC61Q9BV99 259 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 RPRD1BQ9NQG5 326 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 RBFOX1Q9NWB1 397 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 KCNE5Q9UJ90 142 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 H0YIG0 161 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 NTN1O95631 604 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 LALBAP00709 142 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CSTAP01040 98 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PROS1P07225 676 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 HPGDP15428 266 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 HLA-DMAP28067 261 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 LCN1P31025 176 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CD79BP40259 229 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 FASLGP48023 281 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TGM4P49221 684 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 EMDP50402 254 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBR4-203ENST00000375225 PITPNAQ00169 270 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ZNF267Q14586 743 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 PON3Q15166 354 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.25□□□□□ -0.617e-9■■■■■ 38.4
UBR4-203ENST00000375225 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TSSK4Q6SA08 328 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ARL9Q6T311 187 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 CADM2Q8N3J6 435 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TMEM99Q8N816 258 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 OR5M3Q8NGP4 307 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 KISS1RQ969F8 398 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 NECAB3Q96P71 396 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 ERMAPQ96PL5 475 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 SLC38A3Q99624 504 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CHRNA10Q9GZZ6 450 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBR4-203ENST00000375225 C11orf54Q9H0W9 315 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 FBXO34Q9NWN3 711 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 NPFFR2Q9Y5X5 522 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TDRD6O60522 2096 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 ARHGEF17Q96PE2 2063 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 A0A0A6YYC8 382 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 SERINC4A6NH21 518 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 SLC9B1P1A6NJY1 282 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 I3L1I5 382 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 J3QLW9 94 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 M0R296 226 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ORC5O43913 435 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 GATBO75879 557 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 IFNA16P05015 189 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ZNF19P17023 458 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 S1PR1P21453 382 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 SLC2A5P22732 501 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 RPL4P36578 427 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 GRK6P43250 576 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CAPZBP47756 277 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 MRPS15P82914 257 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 CSTF1Q05048 431 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 MRPL28Q13084 256 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 C1orf61Q13536 156 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 IL10RAQ13651 578 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CRMP1Q14194 572 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CARTPTQ16568 116 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 OR6F1Q8NGZ6 308 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 C1orf216Q8TAB5 229 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 LMX1AQ8TE12 382 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PTP4A1Q93096 173 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 C4orf36Q96KX1 117 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TBX5Q99593 518 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 TMEM43Q9BTV4 400 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PPP1R3EQ9H7J1 279 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 MED20Q9H944 212 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 ISG20L2Q9H9L3 353 aaKnown RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 ADGRL4Q9HBW9 690 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 PDE7BQ9NP56 450 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 MEPEQ9NQ76 525 aaPredicted RBP11.25□□□□□ -0.61
UBR4-203ENST00000375225 STARD5Q9NSY2 213 aa11.25□□□□□ -0.61
UBR4-203ENST00000375225 FLRT3Q9NZU0 649 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms