RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NUP54Q7Z3B4 507 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TMCO5AQ8N6Q1 288 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 APCDD1LQ8NCL9 501 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ELOA3Q8NG57 546 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR9Q1Q8NGQ5 310 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NUBPLQ8TB37 319 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 METTL21AQ8WXB1 218 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CENPOQ9BU64 300 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 APMAPQ9HDC9 416 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF337Q9Y3M9 751 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF318Q5VUA4 2279 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 FAM183AA6NL82 134 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CPNE3O75131 537 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 APOL3O95236 402 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PPP1R3DO95685 299 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF3P17036 446 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CCR4P51679 360 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 EMP2P54851 167 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC35F1Q5T1Q4 408 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PHC2Q8IXK0 858 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 BMPERQ8N8U9 685 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR6Q1Q8NGQ2 317 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KISS1RQ969F8 398 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SH3YL1Q96HL8 342 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SPSB2Q99619 263 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF649Q9BS31 505 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GTPBP2Q9BX10 602 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RTN4RQ9BZR6 473 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ADAM19Q9H013 955 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CHRNA9Q9UGM1 479 aa16.45■□□□□ 0.22
HLA-DQB1-201ENST00000374943 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 METTL15A6NJ78 407 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC22A31A6NKX4 558 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GNB5O14775 395 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 FADS1O60427 444 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GPX5O75715 221 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 IFNGP01579 166 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GP1BAP07359 652 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SP9P0CG40 484 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC2A5P22732 501 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PSMA1P25786 263 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OPRL1P41146 370 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NRG3P56975 720 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 FOXL2P58012 376 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NHLH1Q02575 133 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TPBGQ13641 420 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ISXQ2M1V0 245 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 DESI1Q6ICB0 168 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MRPL14Q6P1L8 145 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TMEM205Q6UW68 189 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SHFQ7M4L6 423 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZBTB46Q86UZ6 589 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC37A3Q8NCC5 494 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 AGBL5Q8NDL9 886 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR4F15Q8NGB8 312 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR8K3Q8NH51 312 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR52N1Q8NH53 320 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 S100ZQ8WXG8 99 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 RNF31Q96EP0 1072 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GPX7Q96SL4 187 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 WDR77Q9BQA1 342 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ARHGAP9Q9BRR9 750 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NXF2Q9GZY0 626 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 AKIP1Q9NQ31 210 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TNFRSF10DQ9UBN6 386 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 KLHL21Q9UJP4 597 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 STUB1Q9UNE7 303 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PCDHGB2Q9Y5G2 931 aa16.44■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CCDC182A6NF36 153 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 NDUFB5O43674 189 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CRYBB2P43320 205 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ACSM1Q08AH1 577 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ITGADQ13349 1161 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 EFR3AQ14156 821 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SOWAHCQ53LP3 525 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 DPY19L2P2Q6ZN68 376 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SLC15A4Q8N697 577 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 SIRT6Q8N6T7 355 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 AMER2Q8N7J2 671 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PTP4A1Q93096 173 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 HCAR1Q9BXC0 346 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 TBL1XR1Q9BZK7 514 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 WDR12Q9GZL7 423 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MMP27Q9H306 513 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 WDR54Q9H977 334 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CPAMD8Q8IZJ3 1885 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 CLDN25C9JDP6 229 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 MEN1O00255 615 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ARPC3O15145 178 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PAICSP22234 425 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 EVI2BP34910 448 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 GRK6P43250 576 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 PRPS1P60891 318 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF846Q147U1 533 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ZNF74Q16587 644 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 ANKDD1AQ495B1 522 aa16.43■□□□□ 0.22
HLA-DQB1-201ENST00000374943 OR2G6Q5TZ20 316 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms