RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ZNF354AO60765 605 aaPredicted RBP15.42■□□□□ 0.06
PTPN20-203ENST00000374342 OR7A10O76100 309 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 CD59P13987 128 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 MYL12AP19105 171 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 TACR3P29371 465 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 GAS1P54826 345 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 FBXW4P57775 412 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 NCS1P62166 190 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 FOXK2Q01167 660 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 GXYLT1Q4G148 440 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 IGFN1Q86VF2 1251 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 NACC2Q96BF6 587 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 LRFN5Q96NI6 719 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 CMC2Q9NRP2 79 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 H2AFY2Q9P0M6 372 aaPredicted RBP15.42■□□□□ 0.06
PTPN20-203ENST00000374342 LOXL2Q9Y4K0 774 aa15.42■□□□□ 0.06
PTPN20-203ENST00000374342 PCNX3Q9H6A9 2034 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 B4E171 279 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 AIREO43918 545 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 EIF4E2O60573 245 aaKnown RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ETV5P41161 510 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 TSPAN7P41732 249 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 SLC1A3P43003 542 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ETV1P50549 477 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 CLDN6P56747 220 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 EFR3AQ14156 821 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 TOMM34Q15785 309 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 C3orf38Q5JPI3 329 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 NIPAL3Q6P499 406 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ZBTB46Q86UZ6 589 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 GID4Q8IVV7 300 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 C10orf53Q8N6V4 93 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 EDEM2Q9BV94 578 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 FN3KQ9H479 309 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 FGF20Q9NP95 211 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 TIMMDC1Q9NPL8 285 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 MRPS18AQ9NVS2 196 aaKnown RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 BAIAP2Q9UQB8 552 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 B3GALT1Q9Y5Z6 326 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 TMEM200CA6NKL6 621 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 CDX4O14627 284 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 NDUFB2O95178 105 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 NADKO95544 446 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 UMODP07911 640 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ENDOUP21128 410 aaKnown RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 NOS3P29474 1203 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 HTR1FP30939 366 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 RGS6P49758 472 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 CLK1P49759 484 aaKnown RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 C1DQ13901 141 aaKnown RBP15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ARHGAP11AQ6P4F7 1023 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 POMZP3Q6PJE2 187 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 RTL4Q6ZR62 310 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 NANOGP1Q8N7R0 232 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 OR5L2Q8NGL0 311 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 OPALINQ96PE5 141 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 TMEM43Q9BTV4 400 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 STRADBQ9C0K7 418 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 ZNF337Q9Y3M9 751 aa15.41■□□□□ 0.06
PTPN20-203ENST00000374342 GPR179Q6PRD1 2367 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 MCIDASD6RGH6 385 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 ZFAND5O76080 213 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 ZNF3P17036 446 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 PGCP20142 388 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 TGFBR1P36897 503 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 CBFBQ13951 182 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 PCOLCEQ15113 449 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 SPHARQ15513 63 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 BTBD16Q32M84 506 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 RNLSQ5VYX0 342 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 SLC43A2Q8N370 569 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 OR4F15Q8NGB8 312 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 OR8K3Q8NH51 312 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 OR5W2Q8NH69 310 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 ERMAPQ96PL5 475 aaPredicted RBP15.4■□□□□ 0.06
PTPN20-203ENST00000374342 HCAR1Q9BXC0 346 aa15.4■□□□□ 0.06
PTPN20-203ENST00000374342 ZC3H12DA2A288 527 aaKnown RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 PMS2P1A4D2B8 440 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 PRR23D1E9PI22 279 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 M0R3G1 203 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 PRR23D2P0DMB1 279 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 GP1BBP13224 206 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 HK1P19367 917 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 RPL4P36578 427 aaKnown RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 SOX3P41225 446 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 P2RX1P51575 399 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 DBPQ10586 325 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 KLHL12Q53G59 568 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 DCAF12Q5T6F0 453 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 PROKR2Q8NFJ6 384 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 B4GALNT2Q8NHY0 566 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 CHCHD3Q9NX63 227 aaKnown RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 EXOSC1Q9Y3B2 195 aaKnown RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 LOC100506127A0A0U1RQW1 187 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 CCRL2O00421 344 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 CDC40O60508 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 FOXD2O60548 495 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-203ENST00000374342 CXCR1P25024 350 aa15.39■□□□□ 0.05
PTPN20-203ENST00000374342 ATP6V1E1P36543 226 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms