RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TACO1Q9BSH4 297 aaKnown RBP16.7■□□□□ 0.26
CDX4-201ENST00000373514 PRR14Q9BWN1 585 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 PRDM14Q9GZV8 571 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ALKBH4Q9NXW9 302 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 NCOA6Q14686 2063 aaPredicted RBP16.7■□□□□ 0.26
CDX4-201ENST00000373514 ETV2O00321 342 aaPredicted RBP16.7■□□□□ 0.26
CDX4-201ENST00000373514 HTR2AP28223 471 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 MAGEA2P43356 314 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 CLDN15P56746 228 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 SLC25A53Q5H9E4 307 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 PLEKHM3Q6ZWE6 761 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ZDHHC21Q8IVQ6 265 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ZNF440Q8IYI8 595 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ST8SIA1Q92185 356 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 MRGPRX4Q96LA9 322 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ARHGDIGQ99819 225 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ARMC7Q9H6L4 198 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 IL1RAPQ9NPH3 570 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 CTPS2Q9NRF8 586 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 ACER3Q9NUN7 267 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 FAM215AQ9Y5M1 114 aa16.7■□□□□ 0.26
CDX4-201ENST00000373514 TENM4Q6N022 2769 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 MYO7BQ6PIF6 2116 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 CLOCKO15516 846 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 SEMA7AO75326 666 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 LDLRP01130 860 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 FESP07332 822 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 GP1BBP13224 206 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 SFTPDP35247 375 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 RGS8P57771 180 aaPredicted RBP16.69■□□□□ 0.26
CDX4-201ENST00000373514 SRSF1Q07955 248 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDX4-201ENST00000373514 MERTKQ12866 999 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 NPTX1Q15818 432 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 LRRC36Q1X8D7 754 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 IFI44LQ53G44 452 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 OGFRL1Q5TC84 451 aaPredicted RBP16.69■□□□□ 0.26
CDX4-201ENST00000373514 RTL6Q6ICC9 239 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 ZNF550Q7Z398 422 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 GGNQ86UU5 652 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 RBM45Q8IUH3 476 aaKnown RBP16.69■□□□□ 0.26
CDX4-201ENST00000373514 MARVELD2Q8N4S9 558 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 ICA1LQ8NDH6 482 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 ATP6V1C2Q8NEY4 427 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 CENPNQ96H22 339 aaPredicted RBP16.69■□□□□ 0.26
CDX4-201ENST00000373514 TUBA1CQ9BQE3 449 aa16.69■□□□□ 0.26
CDX4-201ENST00000373514 FAAHO00519 579 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 LRRTM2O43300 516 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 TPST2O60704 377 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 DEAF1O75398 565 aaPredicted RBP16.68■□□□□ 0.26
CDX4-201ENST00000373514 LGI1O95970 557 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 FABP3P05413 133 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 ELK4P28324 431 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 EIF1P41567 113 aaKnown RBP16.68■□□□□ 0.26
CDX4-201ENST00000373514 VLDLRP98155 873 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 NRF1Q16656 503 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 MED12LQ86YW9 2145 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 TMEM234Q8WY98 164 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 DNAJA3Q96EY1 480 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 TP63Q9H3D4 680 aaPredicted RBP16.68■□□□□ 0.26
CDX4-201ENST00000373514 ERRFI1Q9UJM3 462 aaPredicted RBP16.68■□□□□ 0.26
CDX4-201ENST00000373514 SLC13A4Q9UKG4 626 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 BAG5Q9UL15 447 aa16.68■□□□□ 0.26
CDX4-201ENST00000373514 MYO18BQ8IUG5 2567 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 GCN1Q92616 2671 aaKnown RBP16.67■□□□□ 0.26
CDX4-201ENST00000373514 FIGNL2A6NMB9 653 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 hCG_2039718K7EN88 272 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 SYT5O00445 386 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 CCL21O00585 134 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 EIF1AYO14602 144 aaKnown RBP16.67■□□□□ 0.26
CDX4-201ENST00000373514 CST1P01037 141 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 CCNA2P20248 432 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 TACR3P29371 465 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 CASP6P55212 293 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 DLX5P56178 289 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 ZSWIM7Q19AV6 140 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 CTU2Q2VPK5 515 aaKnown RBP16.67■□□□□ 0.26
CDX4-201ENST00000373514 PIWIL3Q7Z3Z3 882 aaKnown RBP16.67■□□□□ 0.26
CDX4-201ENST00000373514 GRINAQ7Z429 371 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 OR6T1Q8NGN1 323 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 RASSF5Q8WWW0 418 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 GEMIN6Q8WXD5 167 aaKnown RBP16.67■□□□□ 0.26
CDX4-201ENST00000373514 C7orf34Q96L11 122 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 KLHL4Q9C0H6 718 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 VCX3BQ9H321 246 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 KLHL28Q9NXS3 571 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 DNAJB9Q9UBS3 223 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 OSGIN1Q9UJX0 560 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 MEMO1Q9Y316 297 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 AP4B1Q9Y6B7 739 aa16.67■□□□□ 0.26
CDX4-201ENST00000373514 DIDO1Q9BTC0 2240 aaKnown RBP16.66■□□□□ 0.26
CDX4-201ENST00000373514 UQCRBP14927 111 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 CPN1P15169 458 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 ACVR2AP27037 513 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 ADH6P28332 368 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 SLC1A3P43003 542 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 OR1E2P47887 323 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 SELENBP1Q13228 472 aa16.66■□□□□ 0.26
CDX4-201ENST00000373514 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.66■□□□□ 0.26
CDX4-201ENST00000373514 ACSF3Q4G176 576 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms