RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 RUNX1T1Q06455 604 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 CDK10Q15131 360 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 MED22Q15528 200 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 MPEG1Q2M385 716 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 ZNF628Q5EBL2 1059 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 ZNF770Q6IQ21 691 aaPredicted RBP18.77■□□□□ 0.6
SYNC-201ENST00000373484 FAM111BQ6SJ93 734 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 OR9A2Q8NGT5 310 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 THAP3Q8WTV1 239 aaPredicted RBP18.77■□□□□ 0.6
SYNC-201ENST00000373484 OR5M11Q96RB7 305 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 RNF32Q9H0A6 362 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 SLA2Q9H6Q3 261 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 RNF167Q9H6Y7 350 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 SLAMF7Q9NQ25 335 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 SH3BP4Q9P0V3 963 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 STUB1Q9UNE7 303 aa18.77■□□□□ 0.6
SYNC-201ENST00000373484 ANKRD34BA5PLL1 514 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 TMEM200CA6NKL6 621 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 CTDSP2O14595 271 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 DDX5P17844 614 aaKnown RBP18.77■□□□□ 0.59
SYNC-201ENST00000373484 AQP1P29972 269 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 SCN1BQ07699 218 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 ARMC4Q5T2S8 1044 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 C9orf40Q8IXQ3 194 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 BEST3Q8N1M1 668 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 ZADH2Q8N4Q0 377 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 RBMXL3Q8N7X1 1067 aaKnown RBP18.77■□□□□ 0.59
SYNC-201ENST00000373484 PROKR2Q8NFJ6 384 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 OR9Q1Q8NGQ5 310 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 ST6GAL2Q96JF0 529 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 SLC35A5Q9BS91 424 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 MND1Q9BWT6 205 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 GLIPR2Q9H4G4 154 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 HHATLQ9HCP6 504 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 MGAT4BQ9UQ53 548 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 CAB39Q9Y376 341 aaPredicted RBP18.77■□□□□ 0.59
SYNC-201ENST00000373484 V9GYH0 126 aa18.77■□□□□ 0.59
SYNC-201ENST00000373484 OR6C76A6NM76 312 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 PDPK1O15530 556 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 FRKP42685 505 aaPredicted RBP18.76■□□□□ 0.59
SYNC-201ENST00000373484 NCBP2P52298 156 aaKnown RBP eCLIP18.76■□□□□ 0.59
SYNC-201ENST00000373484 MLLT11Q13015 90 aaPredicted RBP18.76■□□□□ 0.59
SYNC-201ENST00000373484 CARTPTQ16568 116 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 SLC25A30Q5SVS4 291 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 OR8H2Q8N162 312 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 CLDN22Q8N7P3 220 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 ZNF615Q8N8J6 731 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 GDPD1Q8N9F7 314 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 OR7G1Q8NGA0 311 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 GRPEL2Q8TAA5 225 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 NUBPLQ8TB37 319 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 HAS2Q92819 552 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 CIDECQ96AQ7 238 aaPredicted RBP18.76■□□□□ 0.59
SYNC-201ENST00000373484 TMEM80Q96HE8 168 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 AMDHD1Q96NU7 426 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 TRAF4Q9BUZ4 470 aaPredicted RBP18.76■□□□□ 0.59
SYNC-201ENST00000373484 SRRQ9GZT4 340 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 OR10A5Q9H207 317 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 NDUFB11Q9NX14 153 aa18.76■□□□□ 0.59
SYNC-201ENST00000373484 RPL36Q9Y3U8 105 aaKnown RBP18.76■□□□□ 0.59
SYNC-201ENST00000373484 PRAMEF25A6NGN4 478 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 FAM25AB3EWG3 89 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 FAM25CB3EWG5 89 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 FAM25GB3EWG6 89 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 WDPCPO95876 746 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 IL1AP01583 271 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 IFNW1P05000 195 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 OSMP13725 252 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 ETFAP13804 333 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 NKX2-5P52952 324 aaPredicted RBP18.75■□□□□ 0.59
SYNC-201ENST00000373484 HBA1P69905 142 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 PSPHP78330 225 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 OCLNQ16625 522 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 TRMT12Q53H54 448 aaKnown RBP18.75■□□□□ 0.59
SYNC-201ENST00000373484 KLHL17Q6TDP4 642 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 NRARPQ7Z6K4 114 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 NATD1Q8N6N6 113 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 OR5L2Q8NGL0 311 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 DHRS1Q96LJ7 313 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 SLC22A4Q9H015 551 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 PLA2G3Q9NZ20 509 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 ABI3Q9P2A4 366 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 MYOTQ9UBF9 498 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 CSAG2Q9Y5P2 127 aa18.75■□□□□ 0.59
SYNC-201ENST00000373484 TRIM3O75382 744 aaPredicted RBP18.74■□□□□ 0.59
SYNC-201ENST00000373484 CBX7O95931 251 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 KLRB1Q12918 225 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 EBPQ15125 230 aaKnown RBP18.74■□□□□ 0.59
SYNC-201ENST00000373484 SPHARQ15513 63 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 XKRXQ6PP77 449 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 SLC29A4Q7RTT9 530 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 LIX1LQ8IVB5 337 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 AQP11Q8NBQ7 271 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 OR9Q2Q8NGE9 314 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 NFKBIDQ8NI38 313 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 ASB15Q8WXK1 588 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 KAT2AQ92830 837 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 TRIM63Q969Q1 353 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 MED18Q9BUE0 208 aa18.74■□□□□ 0.59
SYNC-201ENST00000373484 SPENQ96T58 3664 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms