RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZHX1-C8orf76Q96EF9 292 aa11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 CCDC106Q9BWC9 280 aa11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 MANSC1Q9H8J5 431 aa11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 EML4Q9HC35 981 aaKnown RBP11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 HDGFL3Q9Y3E1 203 aa11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 SPIN1Q9Y657 262 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC3-201ENST00000373159 YLPM1P49750 1951 aaKnown RBP11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 A0A1W2PR80 420 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 M0R1B8 84 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 PDLIM1O00151 329 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 CFLARO15519 480 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 LMX1BO60663 402 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 MRPL33O75394 65 aaKnown RBP11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 SHBGP04278 402 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 UBTFL6P0CB48 400 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 TFPIP10646 304 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 APOBEC3AP31941 199 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 PGM1P36871 562 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 ARHGAP11BQ3KRB8 267 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 ATP6AP1LQ52LC2 224 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 C6orf120Q7Z4R8 191 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 C4orf33Q8N1A6 199 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 WDR31Q8NA23 367 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 FAM71CQ8NEG0 241 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 OR5AK3PQ8NH89 298 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 PIGXQ8TBF5 258 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 ARL5BQ96KC2 179 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 C3orf30Q96M34 536 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 DUSP26Q9BV47 211 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 AMBRA1Q9C0C7 1298 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 ZNF350Q9GZX5 532 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 SERHL2Q9H4I8 314 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 FKRPQ9H9S5 495 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 CTPS2Q9NRF8 586 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 CHRNA9Q9UGM1 479 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 MKLN1Q9UL63 735 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 TRAPPC4Q9Y296 219 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
TRAPPC3-201ENST00000373159 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 CENPVL1A0A0U1RR11 272 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 SLU7O95391 586 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 ITGA5P08648 1049 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 GZMKP49863 264 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 FOXG1P55316 489 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 H3F3AP84243 136 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 ADGRG3Q86Y34 549 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 CCDC103Q8IW40 242 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 C17orf78Q8N4C9 275 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 FNDC5Q8NAU1 212 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 MIPOL1Q8TD10 442 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 C1orf50Q9BV19 199 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 C1QTNF6Q9BXI9 259 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 EXD2Q9NVH0 621 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 PARPBPQ9NWS1 579 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 SLC35A3Q9Y2D2 325 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
TRAPPC3-201ENST00000373159 VWC2LB2RUY7 222 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 AGR2O95994 175 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 C8BP07358 591 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 ALDH3A1P30838 453 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 MAGEA8P43361 318 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 CLDN8P56748 225 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 PHC1P78364 1004 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 MAPK14Q16539 360 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 SWI5Q1ZZU3 235 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 MST1LQ2TV78 715 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 OLIG3Q7RTU3 272 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 EIF1ADQ8N9N8 165 aaKnown RBP11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 OR52E4Q8NGH9 312 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 ZNF563Q8TA94 476 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 SLC17A5Q9NRA2 495 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 POLE3Q9NRF9 147 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 MKS1Q9NXB0 559 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 TMEM181Q9P2C4 612 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 AMDHD2Q9Y303 409 aa11.46□□□□□ -0.57
TRAPPC3-201ENST00000373159 SMIM23A6NLE4 172 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 NDUFS8O00217 210 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 KIAA0513O60268 411 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 EIF1BO60739 113 aaKnown RBP11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 BCAS1O75363 584 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 G6PDP11413 515 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 SRD5A1P18405 259 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 IGFBP5P24593 272 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 RYKP34925 604 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 SOAT1P35610 550 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 SERPINB5P36952 375 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 HTR3AP46098 478 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 PDLIM4P50479 330 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 OR2B6P58173 313 aa11.45□□□□□ -0.58
TRAPPC3-201ENST00000373159 KCNJ10P78508 379 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms