RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TGM3Q08188 693 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 CHIT1Q13231 466 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 SERTAD2Q14140 314 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 TMEM35AQ53FP2 167 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 MEDAGQ5VYS4 303 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 TMPRSS11AQ6ZMR5 421 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 SLC44A2Q8IWA5 706 aaPredicted RBP13.64□□□□□ -0.23
LMO4-201ENST00000370542 RDH10Q8IZV5 341 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 CELF2-AS1Q8N7Q2 184 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ACOT4Q8N9L9 421 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 OR52B6Q8NGF0 335 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 OR14A16Q8NHC5 309 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 APH1BQ8WW43 257 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 SLC7A6Q92536 515 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 GGHQ92820 318 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 METTL2AQ96IZ6 378 aaKnown RBP13.64□□□□□ -0.23
LMO4-201ENST00000370542 MAPKAP1Q9BPZ7 522 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 SPOCK3Q9BQ16 436 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ZDHHC11Q9H8X9 412 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 DEPPQ9NTK1 212 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 U3KQV3 271 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 MANBAO00462 879 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 PROM1O43490 865 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 OR2J2O76002 312 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 GLSO94925 669 aaPredicted RBP13.63□□□□□ -0.23
LMO4-201ENST00000370542 SEMA3DO95025 777 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 LGI1O95970 557 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 ADORA3P0DMS8 318 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 CYP4B1P13584 511 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 COX6B1P14854 86 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 GPX2P18283 190 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 HIST1H1TP22492 207 aaPredicted RBP13.63□□□□□ -0.23
LMO4-201ENST00000370542 PTGS2P35354 604 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 GGTA1PQ4G0N0 100 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 RNLSQ5VYX0 342 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 HSDL2Q6YN16 418 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 C16orf47Q6ZP98 133 aaPredicted RBP13.63□□□□□ -0.23
LMO4-201ENST00000370542 CREB3L2Q70SY1 520 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 IQCF2Q8IXL9 164 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 UBE2E3Q969T4 207 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 ANKRD9Q96BM1 317 aaPredicted RBP13.63□□□□□ -0.23
LMO4-201ENST00000370542 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 RNF170Q96K19 258 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 RASL10BQ96S79 203 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
LMO4-201ENST00000370542 GIMAP4Q9NUV9 329 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 CLCA3PQ9Y6N3 262 aa13.63□□□□□ -0.23
LMO4-201ENST00000370542 LOC100506127A0A0U1RQW1 187 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ARRDC5A6NEK1 342 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 RFXANKO14593 260 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 TFECO14948 347 aaPredicted RBP13.62□□□□□ -0.23
LMO4-201ENST00000370542 SHOXO15266 292 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 KIAA0513O60268 411 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ZNF354AO60765 605 aaPredicted RBP13.62□□□□□ -0.23
LMO4-201ENST00000370542 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 CPN2P22792 545 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 IFNA8P32881 189 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 TNFSF8P32971 234 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 C21orf58P58505 322 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 CDC42P60953 191 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 RNF4P78317 190 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 GALK2Q01415 458 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 BIKQ13323 160 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 TNK1Q13470 666 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 CARTPTQ16568 116 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 HYAL4Q2M3T9 481 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 CCDC58Q4VC31 144 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ANKRD34AQ69YU3 496 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ARHGAP11AQ6P4F7 1023 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 IDO2Q6ZQW0 420 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 OR52N2Q8NGI0 321 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ZNF721Q8TF20 911 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 C14orf79Q96F83 325 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 SGCZQ96LD1 299 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 Q96MT0 163 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 IKZF5Q9H5V7 419 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ZNF556Q9HAH1 456 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 SH2D2AQ9NP31 389 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 CLN6Q9NWW5 311 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 HPF1Q9NWY4 346 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 FAM120CQ9NX05 1096 aaKnown RBP13.62□□□□□ -0.23
LMO4-201ENST00000370542 IMPAD1Q9NX62 359 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 UTS2RQ9UKP6 389 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.62□□□□□ -0.23
LMO4-201ENST00000370542 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 ABCG2Q9UNQ0 655 aa13.62□□□□□ -0.23
LMO4-201ENST00000370542 PHF3Q92576 2039 aaKnown RBP13.61□□□□□ -0.23
LMO4-201ENST00000370542 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
LMO4-201ENST00000370542 HCN1O60741 890 aa13.61□□□□□ -0.23
LMO4-201ENST00000370542 LDB3O75112 727 aa13.61□□□□□ -0.23
LMO4-201ENST00000370542 ETHE1O95571 254 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms