RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CLDN15P56746 228 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 KCNC4Q03721 635 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 SGCBQ16585 318 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ULK3Q6PHR2 472 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 Q6ZPB1 254 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 CHMP1BQ7LBR1 199 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 GGNQ86UU5 652 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 SPATA24Q86W54 205 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 PM20D2Q8IYS1 436 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ZNF845Q96IR2 970 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 KLHL15Q96M94 604 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 TRIB1Q96RU8 372 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 TRIM15Q9C019 465 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 MMADHCQ9H3L0 296 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 SLC7A7Q9UM01 511 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 BSNQ9UPA5 3926 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 A0A0B4J2E0 115 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 A0A1B0GX12 115 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 ZC3H12DA2A288 527 aaKnown RBP12.5□□□□□ -0.41
TPM3-211ENST00000368531 TRAPPC13A5PLN9 417 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 GJE1A6NN92 205 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 KDM4EB2RXH2 506 aaPredicted RBP12.5□□□□□ -0.41
TPM3-211ENST00000368531 FMO6PO60774 539 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 SEMA7AO75326 666 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 CIB2O75838 187 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 MT-ND1P03886 318 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 DLX5P56178 289 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 BCL2A1Q16548 175 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 SYT14P1Q58G82 188 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 MTX3Q5HYI7 312 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 C1orf146Q5VVC0 180 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 HBMQ6B0K9 141 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 ZNF613Q6PF04 617 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 GDF7Q7Z4P5 450 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 OR10D3Q8NH80 312 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 UTP4Q969X6 686 aaKnown RBP12.5□□□□□ -0.41
TPM3-211ENST00000368531 SLC41A3Q96GZ6 507 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 ARL5BQ96KC2 179 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 PRDM14Q9GZV8 571 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 FAM32AQ9Y421 112 aaKnown RBP12.5□□□□□ -0.41
TPM3-211ENST00000368531 SPIN1Q9Y657 262 aaPredicted RBP12.5□□□□□ -0.41
TPM3-211ENST00000368531 ENPP4Q9Y6X5 453 aa12.5□□□□□ -0.41
TPM3-211ENST00000368531 ESPL1Q14674 2120 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CLCA1A8K7I4 914 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CCL21O00585 134 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CXCL13O43927 109 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 THY1P04216 161 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 PNMTP11086 282 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 ACVR2AP27037 513 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CA7P43166 264 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CARD18P57730 90 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 RPS3AP61247 264 aaKnown RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 VLDLRP98155 873 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CHRNB3Q05901 458 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 CTU2Q2VPK5 515 aaKnown RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 C1orf185Q5T7R7 199 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 RPTNQ6XPR3 784 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 TSEN54Q7Z6J9 526 aaKnown RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 FJX1Q86VR8 437 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 OR2V1Q8NHB1 315 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 PHF10Q8WUB8 498 aaKnown RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 SLC25A43Q8WUT9 341 aaPredicted RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 OSTF1Q92882 214 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 SLC38A4Q969I6 547 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 PRRC1Q96M27 445 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 FNDC11Q9BVV2 318 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 TP63Q9H3D4 680 aaPredicted RBP12.49□□□□□ -0.41
TPM3-211ENST00000368531 NDUFAF4Q9P032 175 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 A4GNTQ9UNA3 340 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 SPTA1P02549 2419 aa12.49□□□□□ -0.41
TPM3-211ENST00000368531 A0A087WUJ7 227 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 SULT2B1O00204 365 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 FFAR1O14842 300 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 LRRTM2O43300 516 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 CHP2O43745 196 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 WDR1O75083 606 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 OR5F1O95221 314 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 LYPD3O95274 346 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 SEMG1P04279 462 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 FABP3P05413 133 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms