RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 NR0B1P51843 470 aaKnown RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 MLF1P58340 268 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 EEF1A1P68104 462 aaKnown RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 RPP38P78345 283 aaKnown RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 TFF3Q07654 80 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 NPRL3Q12980 569 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 LIN52Q52LA3 116 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 EIPR1Q53HC9 387 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 MRPL2Q5T653 305 aaKnown RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 CDH24Q86UP0 819 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 CNIH3Q8TBE1 160 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 SLC7A13Q8TCU3 470 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 HOXB13Q92826 284 aaPredicted RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 SENP5Q96HI0 755 aaPredicted RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 GABARAPL3Q9BY60 117 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 Q9N2J8 555 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 MAN2C1Q9NTJ4 1040 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 ACAD8Q9UKU7 415 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 GTF3C1Q12789 2109 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 SPG11Q96JI7 2443 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 TCRBV16S1A1N1A0A5B0 115 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 SH3PXD2BA1X283 911 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 DYRK3O43781 588 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 THBS1P07996 1170 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 LINGO3P0C6S8 592 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 PRG2P13727 222 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 ZNF24P17028 368 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 PTNP21246 168 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 RPS4Y1P22090 263 aaKnown RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 EEF1B2P24534 225 aaKnown RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 POU1F1P28069 291 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 FMO3P31513 532 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 GALNSP34059 522 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 UGT2B15P54855 530 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 ISL1P61371 349 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 BIKQ13323 160 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 IL18R1Q13478 541 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 KEAP1Q14145 624 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 ENTPD8Q5MY95 495 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 C6orf141Q5SZD1 244 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 PDZK1Q5T2W1 519 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 ZNF770Q6IQ21 691 aaPredicted RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 KLHL17Q6TDP4 642 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 MEX3BQ6ZN04 569 aaKnown RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 SATL1Q86VE3 508 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 SETD9Q8NE22 299 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 OR7G1Q8NGA0 311 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 RNF217Q8TC41 542 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 SLC2A12Q8TD20 617 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 APOL4Q9BPW4 351 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 UCK2Q9BZX2 261 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 SAP130Q9H0E3 1048 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 RASSF1Q9NS23 344 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 PRODH2Q9UF12 536 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 NDRG4Q9ULP0 352 aaKnown RBP9.06□□□□□ -0.96
TPM3-210ENST00000368530 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
TPM3-210ENST00000368530 A0A1B0GTH9 108 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 A0A1W2PRQ8 180 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 M0R129 80 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 PRRG2O14669 202 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 CYP7B1O75881 506 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 SOX14O95416 240 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 OXSR1O95747 527 aaPredicted RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 ADAP00813 363 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 TFAP2AP05549 437 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 IGFBP1P08833 259 aaPredicted RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 NID1P14543 1247 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 RYKP34925 604 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 CYB561P49447 251 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 HLCSP50747 726 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 SLC37A1P57057 533 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 CDK5R2Q13319 367 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 DGCR6Q14129 220 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 TRAM2Q15035 370 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 ELAVL1Q15717 326 aaKnown RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 CT45A2Q5DJT8 189 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 FOXB2Q5VYV0 432 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 TMEM236Q5W0B7 351 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 LAIR2Q6ISS4 152 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 PGBD2Q6P3X8 592 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 CCDC71Q8IV32 467 aaPredicted RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 SULF2Q8IWU5 870 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 PRR22Q8IZ63 422 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 RPRMLQ8N4K4 120 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 FAM98AQ8NCA5 519 aaKnown RBP9.05□□□□□ -0.96
TPM3-210ENST00000368530 APCDD1LQ8NCL9 501 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 BPIFB6Q8NFQ5 453 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 OR4K5Q8NGD3 323 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 LILRB4Q8NHJ6 448 aa9.05□□□□□ -0.96
TPM3-210ENST00000368530 FAM81AQ8TBF8 368 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms