RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 OAFQ86UD1 273 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 LRRC17Q8N6Y2 441 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 TTLQ8NG68 377 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 OR5D16Q8NGK9 328 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 SPRYD4Q8WW59 207 aaPredicted RBP24.44■■□□□ 1.5
EFNA1-202ENST00000368407 HDHD5Q9BXW7 423 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 INPP5EQ9NRR6 644 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 TEX10Q9NXF1 929 aaPredicted RBP24.44■■□□□ 1.5
EFNA1-202ENST00000368407 COPZ2Q9P299 210 aa24.44■■□□□ 1.5
EFNA1-202ENST00000368407 SMIM30A4D0T7 59 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 RNF13O43567 381 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 F8A1P23610 371 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 AHRP35869 848 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 TRIP6Q15654 476 aaKnown RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 UBE3DQ7Z6J8 389 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 SLITRK4Q8IW52 837 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 CARFQ8N187 725 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 CCDC74BQ96LY2 380 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 OR2M2Q96R28 347 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 CITED4Q96RK1 184 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 MED28Q9H204 178 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 PDE7BQ9NP56 450 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 EIF3KQ9UBQ5 218 aaKnown RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 TEKT2Q9UIF3 430 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 TMA7Q9Y2S6 64 aaKnown RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 GPR52Q9Y2T5 361 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 PCNX2A6NKB5 2137 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 H0YGG7 62 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 APOL3O95236 402 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 NPR2P20594 1047 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 BUD31P41223 144 aaPredicted RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 CTBP2P56545 445 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 PER3P56645 1201 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 ARF3P61204 181 aaPredicted RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 OR4C11Q6IEV9 310 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 DGLUCYQ7Z3D6 616 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 ZFP41Q8N8Y5 198 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 OR4Q3Q8NH05 313 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 HGDQ93099 445 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 SLC41A2Q96JW4 573 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 GHITMQ9H3K2 345 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 FN3KQ9H479 309 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 ZNF768Q9H5H4 540 aaKnown RBP24.43■■□□□ 1.5
EFNA1-202ENST00000368407 NUP50Q9UKX7 468 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 ENTPD4Q9Y227 616 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 NUBP2Q9Y5Y2 271 aa24.43■■□□□ 1.5
EFNA1-202ENST00000368407 P2RX6O15547 441 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 LRRTM2O43300 516 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 PEPDP12955 493 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 PRKAR1BP31321 381 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 GABRA4P48169 554 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 HSD11B2P80365 405 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 PYHIN1Q6K0P9 492 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 SMARCD3Q6STE5 483 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 MCATQ8IVS2 390 aaKnown RBP24.42■■□□□ 1.5
EFNA1-202ENST00000368407 SECISBP2Q96T21 854 aaKnown RBP24.42■■□□□ 1.5
EFNA1-202ENST00000368407 DPYSL5Q9BPU6 564 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 C7orf50Q9BRJ6 194 aaKnown RBP24.42■■□□□ 1.5
EFNA1-202ENST00000368407 WACQ9BTA9 647 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 AICDAQ9GZX7 198 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 TNFRSF10DQ9UBN6 386 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 SLC13A4Q9UKG4 626 aa24.42■■□□□ 1.5
EFNA1-202ENST00000368407 MDC1Q14676 2089 aaKnown RBP24.42■■□□□ 1.5
EFNA1-202ENST00000368407 GFRA3O60609 400 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 AHCYP23526 432 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 STOMP27105 288 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 PDX1P52945 283 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 CLDN6P56747 220 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 COL28A1Q2UY09 1125 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 CDC73Q6P1J9 531 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 ZNF620Q6ZNG0 422 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 RRM2BQ7LG56 351 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 OR4F15Q8NGB8 312 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 OTUB1Q96FW1 271 aaPredicted RBP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 THAP7Q9BT49 309 aaPredicted RBP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 HDHD2Q9H0R4 259 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 KRCC1Q9NPI7 259 aaPredicted RBP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 C5AR2Q9P296 337 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 SLC23A1Q9UHI7 598 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 CACNG2Q9Y698 323 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 CFAP54Q96N23 3096 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 TOX3O15405 576 aaPredicted RBP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 SLC22A5O76082 557 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 OR5F1O95221 314 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 TPOP07202 933 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 PITPNBP48739 271 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 ARL4DP49703 201 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 VSX2P58304 361 aaPredicted RBP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 LSM11P83369 360 aaKnown RBP eCLIP24.41■■□□□ 1.5
EFNA1-202ENST00000368407 PHF19Q5T6S3 580 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 ASPGQ86U10 573 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 CHRNA10Q9GZZ6 450 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 KCNN3Q9UGI6 736 aa24.41■■□□□ 1.5
EFNA1-202ENST00000368407 A0A0A6YYJ9 748 aa24.4■■□□□ 1.5
EFNA1-202ENST00000368407 LOC105371267A0A1B0GV96 52 aa24.4■■□□□ 1.5
EFNA1-202ENST00000368407 NCR1O76036 304 aa24.4■■□□□ 1.5
EFNA1-202ENST00000368407 ANKRD34CP0C6C1 535 aa24.4■■□□□ 1.5
EFNA1-202ENST00000368407 NCBP2P52298 156 aaKnown RBP eCLIP24.4■■□□□ 1.54e-16■□□□□ 9.3
EFNA1-202ENST00000368407 SNRPNP63162 240 aaKnown RBP24.4■■□□□ 1.5
EFNA1-202ENST00000368407 NDUFAF5Q5TEU4 345 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms