RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 DEFB126Q9BYW3 111 aa10.87□□□□□ -0.67
COPA-202ENST00000368069 SLC23A2Q9UGH3 650 aa10.87□□□□□ -0.67
COPA-202ENST00000368069 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
COPA-202ENST00000368069 ARID1BQ8NFD5 2236 aaPredicted RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 IGLV3-16A0A075B6K0 115 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 VSTM2BA6NLU5 285 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 CD160O95971 181 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 ARSBP15848 533 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 TEAD1P28347 426 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 SSTR2P30874 369 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 SLC6A8P48029 635 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 RAB38P57729 211 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 HNRNPKP61978 463 aaKnown RBP eCLIP10.86□□□□□ -0.672e-6■■■■□ 22.2
COPA-202ENST00000368069 GALK2Q01415 458 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 SF3B4Q15427 424 aaKnown RBP eCLIP10.86□□□□□ -0.679e-7■■■■□ 21
COPA-202ENST00000368069 NKAPLQ5M9Q1 402 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 TCEAL6Q6IPX3 200 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 C7orf34Q96L11 122 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 DOK1Q99704 481 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 MRI1Q9BV20 369 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 DKKL1Q9UK85 242 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 F13BP05160 661 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 CHRM4P08173 479 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 SYPP08247 313 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 MAT1AQ00266 395 aaKnown RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 FAM3CQ92520 227 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 OR2M2Q96R28 347 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 EVA1AQ9H8M9 152 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 GALNT9Q9HCQ5 603 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 MEPEQ9NQ76 525 aaPredicted RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 POT1Q9NUX5 634 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 GMEB2Q9UKD1 530 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 PRELID1Q9Y255 219 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 URB1O60287 2271 aaKnown RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 OR8G3PP0DMU2 310 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 CHRNB1P11230 501 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 CD34P28906 385 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 TSFMP43897 325 aaKnown RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 CLDN12P56749 244 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 RRAS2P62070 204 aaPredicted RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 MRPS10P82664 201 aaKnown RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 SQSTM1Q13501 440 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 GPR18Q14330 331 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 DUSP5Q16690 384 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 NKPD1Q17RQ9 610 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 COL28A1Q2UY09 1125 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 GARNL3Q5VVW2 1013 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 PRAMEF8Q5VWM4 474 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 PRAMEF7Q5VXH5 474 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 WBP2NLQ6ICG8 309 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 HAVCR2Q8TDQ0 301 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 TBC1D20Q96BZ9 403 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 TOE1Q96GM8 510 aaKnown RBP10.86□□□□□ -0.67
COPA-202ENST00000368069 FGF22Q9HCT0 170 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 C2orf42Q9NWW7 574 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 SPHK1Q9NYA1 384 aa10.86□□□□□ -0.67
COPA-202ENST00000368069 LINC01553A4QN01 128 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 EEF1E1-BLOC1S5C9J1V9 151 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 GPRIN2O60269 458 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 SC5DO75845 299 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 AGTR1P30556 359 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 RBMXP38159 391 aaKnown RBP10.85□□□□□ -0.67
COPA-202ENST00000368069 SIRPAP78324 504 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 POU4F3Q15319 338 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 PLXDC1Q8IUK5 500 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 SLC35F3Q8IY50 421 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 PFN4Q8NHR9 129 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 SLC35B4Q969S0 331 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 SHDQ96IW2 340 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 CSF3RQ99062 836 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 FN3KQ9H479 309 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
COPA-202ENST00000368069 COQ3Q9NZJ6 369 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 ZNF281Q9Y2X9 895 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 OR7A10O76100 309 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 APOC3P02656 99 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 AKR1C4P17516 323 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 LIM2P55344 173 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
COPA-202ENST00000368069 RNF165Q6ZSG1 346 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 PDZD9Q8IXQ8 264 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 GIMAP1Q8WWP7 306 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 PMM1Q92871 262 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 BMFQ96LC9 184 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 NOX3Q9HBY0 568 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 ARRDC5A6NEK1 342 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 UPK1AO00322 258 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 TP53I11O14683 189 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 SLC22A5O76082 557 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 RAB3DO95716 219 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 CSF1P09603 554 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 TGM4P49221 684 aa10.85□□□□□ -0.67
COPA-202ENST00000368069 PRKXP51817 358 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms