RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 LSSP48449 732 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 KNTC1P50748 2209 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 GPR143P51810 404 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RPS15AP62244 130 aaKnown RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SIRPAP78324 504 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ARHGAP19Q14CB8 494 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 FAM76BQ5HYJ3 339 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TOR2AQ5JU69 321 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 YOD1Q5VVQ6 348 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 KCTD20Q7Z5Y7 419 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 FAM46BQ96A09 425 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ELP4Q96EB1 424 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ABRACLQ9P1F3 81 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 CA5BQ9Y2D0 317 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 A0A1W2PR48 441 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SGK494L7N484 410 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RDH16O75452 317 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 GABRB1P18505 474 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RPS21P63220 83 aaKnown RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TPRA1Q86W33 373 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TEAD3Q99594 435 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 MICU1Q9BPX6 476 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ARHGAP9Q9BRR9 750 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 PRTFDC1Q9NRG1 225 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 KCNN3Q9UGI6 736 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 CEBPBP17676 345 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 NFYAP23511 347 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 SLC6A9P48067 706 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 SMAD2Q15796 467 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 OR52N1Q8NH53 320 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 FCRL1Q96LA6 429 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 DCLRE1CQ96SD1 692 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 KCNE3Q9Y6H6 103 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 NTN1O95631 604 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 DCNP07585 359 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 CLUP10909 449 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 PKLRP30613 574 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 ARHGAP40Q5TG30 622 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 ASB6Q9NWX5 421 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 SLC23A2Q9UGH3 650 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 PPM1BO75688 479 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 FPR3P25089 353 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 GALK2Q01415 458 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 FAM26DQ5JW98 314 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM205Q6UW68 189 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 UPRTQ96BW1 309 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 EDARQ9UNE0 448 aa12.92□□□□□ -0.34
COL6A1-201ENST00000361866 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
COL6A1-201ENST00000361866 SIPA1L1O43166 1804 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PEX12O00623 359 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PRAF2O60831 178 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 HCKP08631 526 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PRPH2P23942 346 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 CD34P28906 385 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 BCL6P41182 706 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 GZMMP51124 257 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 CLDN20P56880 219 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 EXOSC2Q13868 293 aaKnown RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 KIAA1211LQ6NV74 962 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PRR22Q8IZ63 422 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 DEFB119Q8N690 84 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 AMER3Q8N944 861 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 STOML3Q8TAV4 291 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 UCN3Q969E3 161 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TBC1D20Q96BZ9 403 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TRMT61AQ96FX7 289 aaKnown RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 EPHA6Q9UF33 1036 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 VNN2O95498 520 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 RAF1P04049 648 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 PTHLHP12272 177 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 CD79BP40259 229 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 RFX2P48378 723 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 IFITM2Q01629 132 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TEKQ02763 1124 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 OTPQ5XKR4 325 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 SLC35D2Q76EJ3 337 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 LAS2Q8IYD9 372 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 HAVCR1Q96D42 359 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 COPS7AQ9UBW8 275 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 A4GNTQ9UNA3 340 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms