RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PRPH2P23942 346 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 CENPAP49450 140 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 DLX5P56178 289 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 AP3S2P59780 193 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 MRPL58Q14197 206 aaKnown RBP11.78□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF234Q14588 700 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 PABPC1L2AQ5JQF8 200 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 OR7E24Q6IFN5 339 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 KIAA1211LQ6NV74 962 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 ARL14Q8N4G2 192 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 OR9A1PQ8NGU1 263 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 GPR174Q9BXC1 333 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 TM7SF3Q9NS93 570 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 KLHL9Q9P2J3 617 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 CDV3Q9UKY7 258 aaKnown RBP11.78□□□□□ -0.52
VAMP1-201ENST00000361716 DOCK6Q96HP0 2047 aa11.78□□□□□ -0.52
VAMP1-201ENST00000361716 WASH3PC4AMC7 463 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 RPP14O95059 124 aaKnown RBP11.77□□□□□ -0.52
VAMP1-201ENST00000361716 FGBP02675 491 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 HIST1H2ABP04908 130 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 MPC1LP0DKB6 136 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 MAT2AP31153 395 aaKnown RBP11.77□□□□□ -0.52
VAMP1-201ENST00000361716 H2BFSP57053 126 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 RAB33AQ14088 237 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 PRRT3Q5FWE3 981 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 AVPI1Q5T686 147 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 NXPE4Q6UWF7 544 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 HIST3H2AQ7L7L0 130 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 SVBPQ8N300 66 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 KCT2Q8NC54 265 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 OR14A16Q8NHC5 309 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 HIST1H2ACQ93077 130 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.52
VAMP1-201ENST00000361716 PITHD1Q9GZP4 211 aaPredicted RBP11.77□□□□□ -0.52
VAMP1-201ENST00000361716 CBLCQ9ULV8 474 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 RPH3AQ9Y2J0 694 aaPredicted RBP11.77□□□□□ -0.52
VAMP1-201ENST00000361716 OR51B4Q9Y5P0 310 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 SCN2AQ99250 2005 aa11.77□□□□□ -0.52
VAMP1-201ENST00000361716 CDHR4A6H8M9 788 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 TUBAL3A6NHL2 446 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 SELENOFO60613 162 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 IFNGR1P15260 489 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 UGT2B7P16662 529 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 CSF2RBP32927 897 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 THBS2P35442 1172 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 GAS1P54826 345 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 PCGF3Q3KNV8 242 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 ZNF704Q6ZNC4 412 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 OR2T33Q8NG76 320 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 OR1S2Q8NGQ3 325 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 TFGQ92734 400 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 HCAR1Q9BXC0 346 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 FKRPQ9H9S5 495 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 FBXL4Q9UKA2 621 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 SLC22A7Q9Y694 548 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 NPIPA5A0A0B4J1W7 369 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 NPIPA7E9PJI5 369 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 ERI3O43414 337 aaKnown RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 ADAM11O75078 769 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 PCCBP05166 539 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 NPIPA8P0DM63 369 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 NTSP30990 170 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 PTGFRP43088 359 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 MMP15P51511 669 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 CORO6Q6QEF8 472 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 GLDNQ6ZMI3 551 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 BEST3Q8N1M1 668 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 OR52L1Q8NGH7 329 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 SNX33Q8WV41 574 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 ALG14Q96F25 216 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 PFDN5Q99471 154 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 SEMA4GQ9NTN9 838 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 KLHL28Q9NXS3 571 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 ZNF230Q9UIE0 474 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-201ENST00000361716 PLEKHM1Q9Y4G2 1056 aa11.77□□□□□ -0.53
VAMP1-201ENST00000361716 A0A1W2PS29 197 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 ARRDC5A6NEK1 342 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 PRAF2O60831 178 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 C1orf105O95561 183 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 HMGN2P05204 90 aaKnown RBP11.76□□□□□ -0.53
VAMP1-201ENST00000361716 EDNRAP25101 427 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 SMAD2Q15796 467 aaKnown RBP11.76□□□□□ -0.53
VAMP1-201ENST00000361716 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
VAMP1-201ENST00000361716 TSSK4Q6SA08 328 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 CBARPQ8N350 705 aaPredicted RBP11.76□□□□□ -0.53
VAMP1-201ENST00000361716 STK35Q8TDR2 534 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 GRHL3Q8TE85 626 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 IGSF21Q96ID5 467 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 MS4A4EQ96PG1 132 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 HHIPQ96QV1 700 aa11.76□□□□□ -0.53
VAMP1-201ENST00000361716 ACSS1Q9NUB1 689 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms