RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SLC31A1O15431 190 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RGS5O15539 181 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 SEC14L5O43304 696 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TNFSF14O43557 240 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 DYRK3O43781 588 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 OR5F1O95221 314 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 CER1O95813 267 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 APOA1P02647 267 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D3HP0C7X1 549 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PNLIPP16233 465 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 NDUFS1P28331 727 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 FGF9P31371 208 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 AVPR1BP47901 424 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RFX2P48378 723 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 KIAA1024LP59773 190 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PPP2CBP62714 309 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PPP2CAP67775 309 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 HOXC5Q00444 222 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ARHGAP11BQ3KRB8 267 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D3GQ6DHY5 549 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 C22orf42Q6IC83 251 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D3CQ6IPX1 549 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 QSOX2Q6ZRP7 698 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 MBOAT2Q6ZWT7 520 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 C16orf62Q7Z3J2 963 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TBC1D3Q8IZP1 549 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 LRRC25Q8N386 305 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PIGXQ8TBF5 258 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ADAMTS15Q8TE58 950 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 GANCQ8TET4 914 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 OSTF1Q92882 214 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM203Q969S6 136 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TMCO6Q96DC7 493 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RNF125Q96EQ8 232 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 OR2A5Q96R48 311 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 MED17Q9NVC6 651 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM160Q9NX00 188 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 SLC13A4Q9UKG4 626 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF443Q9Y2A4 671 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 EXOGQ9Y2C4 368 aaKnown RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 YBX2Q9Y2T7 364 aaKnown RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PIAS3Q9Y6X2 628 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 LAMA1P25391 3075 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 GNSP15586 552 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 PTNP21246 168 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 GABRA5P31644 462 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 GALNSP34059 522 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 CD79BP40259 229 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 SLC9A3P48764 834 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RPS25P62851 125 aaKnown RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 EEF1A1P68104 462 aaKnown RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 MXD1Q05195 221 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RUNX1T1Q06455 604 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 RGS1Q08116 209 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ACSM1Q08AH1 577 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 HABP2Q14520 560 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 AGAP6Q5VW22 663 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 HSDL2Q6YN16 418 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM184AQ6ZMB5 413 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 MTSS1LQ765P7 747 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TOR1AIP2Q8NFQ8 470 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 OR1E3Q8WZA6 343 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 CDS1Q92903 461 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 SLC41A3Q96GZ6 507 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ABHD8Q96I13 439 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 KCTD7Q96MP8 289 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 SLC46A1Q96NT5 459 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 AGAP4Q96P64 663 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 MCHR1Q99705 422 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 HOXD1Q9GZZ0 328 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 TPK1Q9H3S4 243 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 ABCB9Q9NP78 766 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 KLHL28Q9NXS3 571 aa6.74□□□□□ -1.33
CLCN3-202ENST00000360642 YARS2Q9Y2Z4 477 aaKnown RBP6.74□□□□□ -1.33
CLCN3-202ENST00000360642 CEP290O15078 2479 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 J3QRE1 110 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 AP3D1O14617 1153 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 P2RX6O15547 441 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 LRRTM2O43300 516 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CTSVO60911 334 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 DNAJB6O75190 326 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 KNG1P01042 644 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 IGHA1P01876 353 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TSPAN19P0C672 248 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 AK4P27144 223 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SDC2P34741 201 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SLC1A3P43003 542 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF136P52737 540 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 RGS8P57771 180 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 FABP5Q01469 135 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF155Q12901 538 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 HNRNPA0Q13151 305 aaKnown RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 FZD5Q13467 585 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 MADCAM1Q13477 382 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 GPR50Q13585 617 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 RUNX2Q13950 521 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CLEC12AQ5QGZ9 265 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 FHL5Q5TD97 284 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SLC30A6Q6NXT4 461 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF836Q6ZNA1 936 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms