RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TRGV5A0A0B4J1U4 118 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TIPRLO75663 272 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 KRT36O76013 467 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 CST1P01037 141 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 H1F0P07305 194 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 IL11P20809 199 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 CXCR1P25024 350 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SMIM11AP58511 58 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 DGCR6Q14129 220 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 KRTCAP3Q53RY4 240 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 NHSL2Q5HYW2 709 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 WDR88Q6ZMY6 472 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 GPR137Q96N19 417 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SFXN2Q96NB2 322 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF426Q9BUY5 554 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TSPAN10Q9H1Z9 355 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 LDAHQ9H6V9 325 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SERINC1Q9NRX5 453 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 DNAJB9Q9UBS3 223 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC6A5Q9Y345 797 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TESMINQ9Y4I5 508 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 LIPGQ9Y5X9 500 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 BSNQ9UPA5 3926 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM72A0PK05 275 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ELOA3DA6NLF2 546 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ADAMDEC1O15204 470 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 CLOCKO15516 846 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF208O43345 1280 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 GADD45GO95257 159 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ACTL6AO96019 429 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 FCGR1AP12314 374 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 BMP7P18075 431 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 FKBP2P26885 142 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 RRM2P31350 389 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 LIMS1P48059 325 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 RAC1P63000 192 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 SPIBQ01892 262 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 SELENBP1Q13228 472 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 TRAM2Q15035 370 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ELOA3BQ3SY89 546 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 VASNQ6EMK4 673 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ELOA3Q8NG57 546 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 HS6ST2Q96MM7 605 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 FUZQ9BT04 418 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 NTN4Q9HB63 628 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 ASF1BQ9NVP2 202 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 CHRNA9Q9UGM1 479 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 AP4B1Q9Y6B7 739 aa11.19□□□□□ -0.62
NIF3L1-201ENST00000359683 IGKV1D-42A0A075B6H8 117 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 TTLL8A6PVC2 850 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 AQP7O14520 342 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 NPIPB7O75200 414 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 FASP25445 335 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 RBM34P42696 430 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 CLK1P49759 484 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 EGR4Q05215 589 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 GK3PQ14409 553 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 BCL2A1Q16548 175 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 POMZP3Q6PJE2 187 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 LILRA2Q8N149 483 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 OR4C15Q8NGM1 316 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 RNF217Q8TC41 542 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC7A13Q8TCU3 470 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC25A43Q8WUT9 341 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 LRTOMTQ8WZ04 291 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 STMN2Q93045 179 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 ABTB1Q969K4 478 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 SLX1AQ9BQ83 275 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM43Q9BTV4 400 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 POTEKPQ9BYX7 375 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 AGPAT4Q9NRZ5 378 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 VNN3Q9NY84 501 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 LYVE1Q9Y5Y7 322 aa11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 SPIN1Q9Y657 262 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 PRRC2CQ9Y520 2896 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-201ENST00000359683 A0A087WUU8 490 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 A8MVM7 634 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TNFRSF11BO00300 401 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 LDLRP01130 860 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 PEPDP12955 493 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 CCNA2P20248 432 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 GCKP35557 465 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 STARP49675 285 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 LHX2P50458 406 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 CRYZQ08257 329 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 HMBOX1Q6NT76 420 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 C3orf33Q6P1S2 294 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 PODNL1Q6PEZ8 512 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TTC33Q6PID6 262 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms