RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
TPM1-206ENST00000358278 SLC38A4Q969I6 547 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SARAFQ96BY9 339 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 PIP5K1AQ99755 562 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 C12orf10Q9HB07 376 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 RHCGQ9UBD6 479 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 ACAD8Q9UKU7 415 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 AP4B1Q9Y6B7 739 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 OR14I1A6ND48 311 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 GJE1A6NN92 205 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 NPIPA2E9PIF3 369 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 NPIPA3F8WFD2 350 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 OPN1LWP04000 364 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 SLC7A1P30825 629 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 STARP49675 285 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 RAC1P63000 192 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 SPIBQ01892 262 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 CRYZQ08257 329 aaKnown RBP13.75□□□□□ -0.21
TPM1-206ENST00000358278 DCST1Q5T197 706 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 PIWIL3Q7Z3Z3 882 aaKnown RBP13.75□□□□□ -0.21
TPM1-206ENST00000358278 TSEN54Q7Z6J9 526 aaKnown RBP13.75□□□□□ -0.21
TPM1-206ENST00000358278 RELTQ969Z4 430 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 DDIT4LQ96D03 193 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 ZNF347Q96SE7 839 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 CCM2LQ9NUG4 571 aaPredicted RBP13.75□□□□□ -0.21
TPM1-206ENST00000358278 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
TPM1-206ENST00000358278 PHF3Q92576 2039 aaKnown RBP13.74□□□□□ -0.21
TPM1-206ENST00000358278 A0A087WUJ7 227 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 TMEM72A0PK05 275 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 B8ZZF3 427 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 FFAR1O14842 300 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 ZNHIT1O43257 154 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 EFNA2O43921 213 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 FKBP6O75344 327 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 PRSS23O95084 383 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 THY1P04216 161 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 H1F0P07305 194 aaKnown RBP13.74□□□□□ -0.21
TPM1-206ENST00000358278 TFPIP10646 304 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 THRBP10828 461 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 ABOP16442 354 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 PTNP21246 168 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 PTGS2P35354 604 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 LHX2P50458 406 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 MAP2K6P52564 334 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 SRYQ05066 204 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 RBPJQ06330 500 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 SYT14P1Q58G82 188 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 ZNF843Q8N446 348 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 MPP4Q96JB8 637 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 TIMP4Q99727 224 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 NMNAT1Q9HAN9 279 aaPredicted RBP13.74□□□□□ -0.21
TPM1-206ENST00000358278 RALYQ9UKM9 306 aaKnown RBP13.74□□□□□ -0.21
TPM1-206ENST00000358278 CAMK2AQ9UQM7 478 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 POLEQ07864 2286 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 ZNF462Q96JM2 2506 aa13.74□□□□□ -0.21
TPM1-206ENST00000358278 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 DOCK7Q96N67 2140 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ZNF208O43345 1280 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ZNF708P17019 499 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 FKBP2P26885 142 aaKnown RBP13.73□□□□□ -0.21
TPM1-206ENST00000358278 RRM2P31350 389 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 CLDN20P56880 219 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TRAM2Q15035 370 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 C3AR1Q16581 482 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TMEM176BQ3YBM2 270 aaPredicted RBP13.73□□□□□ -0.21
TPM1-206ENST00000358278 IQCCQ4KMZ1 466 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 LSRQ86X29 649 aaPredicted RBP13.73□□□□□ -0.21
TPM1-206ENST00000358278 MEIOBQ8N635 442 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 SLCO4A1Q96BD0 722 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 KLHL15Q96M94 604 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 OR5B2Q96R09 309 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 OR11A1Q9GZK7 315 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 A8MVM7 634 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 H0Y3Z8 333 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 EIF1AYO14602 144 aaKnown RBP13.73□□□□□ -0.21
TPM1-206ENST00000358278 BCKDKO14874 412 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ENTPD5O75356 428 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 C1QL1O75973 258 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 GADD45GO95257 159 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 CST1P01037 141 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TPOP07202 933 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 SHC1P29353 583 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 CLDN18P56856 261 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 SMIM11AP58511 58 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TLE1Q04724 770 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TTC33Q6PID6 262 aaPredicted RBP13.73□□□□□ -0.21
TPM1-206ENST00000358278 WDR88Q6ZMY6 472 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ESPNLQ6ZVH7 1005 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ZNF605Q86T29 641 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 NKAIN4Q8IVV8 208 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 PM20D2Q8IYS1 436 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ST6GALNAC3Q8NDV1 305 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 TMEM255BQ8WV15 326 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms