RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SENP5Q96HI0 755 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 ACKR4Q9NPB9 350 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PRMT8Q9NR22 394 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 HHLA1C9JL84 531 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 SGK494L7N484 410 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 CTSAP10619 480 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 APEX1P27695 318 aaKnown RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 SFTPDP35247 375 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 RPP30P78346 268 aaKnown RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 KCNJ10P78508 379 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PDE7AQ13946 482 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 FAM122CQ6P4D5 195 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 CREB3L2Q70SY1 520 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 TERB2Q8NHR7 220 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 ELOVL3Q9HB03 270 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 MYADML2A6NDP7 307 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 RFXAPO00287 272 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 CSF2RAP15509 400 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 HTD2P86397 168 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 CCNJQ5T5M9 372 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 TMEM184AQ6ZMB5 413 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 Q6ZSR9 355 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 MRPL21Q7Z2W9 205 aaKnown RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 SLAMF9Q96A28 289 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 HOXB5P09067 269 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 IRF2P14316 349 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 GABRR1P24046 479 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 FOXK1P85037 733 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 FAPQ12884 760 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 OR7A5Q15622 319 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 BATFQ16520 125 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PELI3Q8N2H9 469 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 OR4D6Q8NGJ1 314 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 HAS2Q92819 552 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 ZNF582Q96NG8 517 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 NMNAT2Q9BZQ4 307 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PLEK2Q9NYT0 353 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 POLHQ9Y253 713 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 RPH3AQ9Y2J0 694 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 A0A0A6YYC8 382 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 I3L1I5 382 aaPredicted RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 TIMP2P16035 220 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 PTGER1P34995 402 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 HNRNPA1L2Q32P51 320 aaKnown RBP13.87□□□□□ -0.19
CHD4-201ENST00000357008 ACTBL2Q562R1 376 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 ESCO2Q56NI9 601 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 UBTD2Q8WUN7 234 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 MACROD1Q9BQ69 325 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 NRIP3Q9NQ35 241 aa13.87□□□□□ -0.19
CHD4-201ENST00000357008 RPS10-NUDT3A0A1W2PQS6 291 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 KCNK5O95279 499 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 CPMP14384 443 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 CD79BP40259 229 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 RPS10P46783 165 aaKnown RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 TAS2R46P59540 309 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 COL9A2Q14055 689 aaPredicted RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 SFXN4Q6P4A7 337 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 HTR3DQ70Z44 454 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 ZNF761Q86XN6 746 aaPredicted RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 PRR22Q8IZ63 422 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SLC38A5Q8WUX1 472 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 C11orf54Q9H0W9 315 aaPredicted RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 WASH6PQ9NQA3 447 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SEMA4GQ9NTN9 838 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 PCDHGA6Q9Y5G7 932 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 CR2P20023 1033 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 BORCS7Q96B45 105 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 HCAR1Q9BXC0 346 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SIAEQ9HAT2 523 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 TNFRSF10AO00220 468 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 OR2T7P0C7T2 308 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 ETV5P41161 510 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 EXOSC7Q15024 291 aaKnown RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 GAREM2Q75VX8 874 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 OR2T27Q8NH04 317 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 CDH20Q9HBT6 801 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 EMC7Q9NPA0 242 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 CBLCQ9ULV8 474 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 A0A0U1RQK1 487 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 TCRBP04435 133 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SERPINA7P05543 415 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SIRPAP78324 504 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 RBM39Q14498 530 aaKnown RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 MPEG1Q2M385 716 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 NUP188Q5SRE5 1749 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 RAB9BQ9NP90 201 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 EHFQ9NZC4 300 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 FBXL2Q9UKC9 423 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 MYO10Q9HD67 2058 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 C17orf113A0A1B0GUU1 675 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms