RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 MTNR1AP48039 350 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 EGR4Q05215 589 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 ITGADQ13349 1161 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 ETFDHQ16134 617 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 METAP1DQ6UB28 335 aaPredicted RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 ERI1Q8IV48 349 aaKnown RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 DEPDC4Q8N2C3 294 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 OR8J1Q8NGP2 316 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 STACQ99469 402 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 KATNB1Q9BVA0 655 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 DCSTAMPQ9H295 470 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 SIGLEC7Q9Y286 467 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 N6AMT1Q9Y5N5 214 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 DOCK10Q96BY6 2186 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 IGKV3D-11A0A0A0MRZ8 115 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 FITM1A5D6W6 292 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 D6RAR5 112 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 RGS5O15539 181 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 DRD5P21918 477 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 RGS6P49758 472 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 RNF4P78317 190 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 FOXK2Q01167 660 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 ZNF362Q5T0B9 420 aaPredicted RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 ZNF468Q5VIY5 522 aaPredicted RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 CXXC5Q7LFL8 322 aaKnown RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 C1GALT1C1Q96EU7 318 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 SPSB2Q99619 263 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 MCCC2Q9HCC0 563 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 TUBA8Q9NY65 449 aaPredicted RBP12.67□□□□□ -0.38
LSS-201ENST00000356396 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
LSS-201ENST00000356396 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 A0A1W2PNU3 283 aaPredicted RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 ELOA3DA6NLF2 546 aaPredicted RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 C12orf71A8MTZ7 269 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 UBL4AP11441 157 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 GTF2E2P29084 291 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 RXRGP48443 463 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 ELOA3BQ3SY89 546 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SLC37A3Q8NCC5 494 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 ELOA3Q8NG57 546 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 OR2T33Q8NG76 320 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SYT5O00445 386 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 MYL12BO14950 172 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SELENOFO60613 162 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 AVPR2P30518 371 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 DCDP81605 110 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 IL18R1Q13478 541 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SQSTM1Q13501 440 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 TP53I3Q53FA7 332 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 ANKRD37Q7Z713 158 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 ADCK1Q86TW2 530 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 MYDGFQ969H8 173 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SIGLEC11Q96RL6 698 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 LMF2Q9BU23 707 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SLC25A19Q9HC21 320 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 RPRD1BQ9NQG5 326 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 PRMT8Q9NR22 394 aaPredicted RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 SUSD2Q9UGT4 822 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 PCDHGA3Q9Y5H0 932 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 TEX13CA0A0J9YWL9 993 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SFTPDP35247 375 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 DNASE1L3Q13609 305 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 NR1D2Q14995 579 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 TOMM20Q15388 145 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 SPHARQ15513 63 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 RHBDD2Q6NTF9 364 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
LSS-201ENST00000356396 TAAR8Q969N4 342 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 ZNF318Q5VUA4 2279 aa12.66□□□□□ -0.38
LSS-201ENST00000356396 POLEQ07864 2286 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 A0A1W2PNR3 127 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 RPP14O95059 124 aaKnown RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 OR5F1O95221 314 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 F8A1P23610 371 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 OR12D2P58182 307 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 FHL1Q13642 323 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 MEP1BQ16820 701 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ZMAT1Q5H9K5 638 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SYT6Q5T7P8 510 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms