RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TXNDC12O95881 172 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 SCG5P05408 212 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 CDK4P11802 303 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 LIPAP38571 399 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 MTNR1AP48039 350 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF74Q16587 644 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 SHISA6Q6ZSJ9 500 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 CADM2Q8N3J6 435 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF524Q96C55 264 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 HINT3Q9NQE9 182 aaKnown RBP15.7■□□□□ 0.1
VPS13B-201ENST00000355155 IGHV3-20A0A0C4DH32 117 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 TRBV11-1A0A0K0K1C0 115 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 ANKUB1A6NFN9 424 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 PLD2O14939 933 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 ASAH2BP0C7U1 165 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 PSMB9P28065 219 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 PRPS1P60891 318 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 EGR4Q05215 589 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 CRYZQ08257 329 aaKnown RBP15.7■□□□□ 0.1
VPS13B-201ENST00000355155 EIF3IQ13347 325 aaKnown RBP15.7■□□□□ 0.1
VPS13B-201ENST00000355155 NTRK2Q16620 822 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 DCAF12Q5T6F0 453 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 NIPAL3Q6P499 406 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 OAFQ86UD1 273 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 PRR22Q8IZ63 422 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 TMCO6Q96DC7 493 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 RNFT2Q96EX2 444 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 FRMD6Q96NE9 622 aa15.7■□□□□ 0.1
VPS13B-201ENST00000355155 FAM86C2PA6NEL3 165 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CCDC182A6NF36 153 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 VGLL3A8MV65 326 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 COX6A1P12074 109 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 MSX1P28360 303 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 HTR3AP46098 478 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 MLLT11Q13015 90 aaPredicted RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CCDC81Q6ZN84 652 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 MARCH3Q86UD3 253 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 ATCAYQ86WG3 371 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 SECISBP2Q96T21 854 aaKnown RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 TBL1XR1Q9BZK7 514 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 AKIRIN1Q9H9L7 192 aaPredicted RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 NRIP3Q9NQ35 241 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 MYOTQ9UBF9 498 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF229Q9UJW7 825 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 LOXL2Q9Y4K0 774 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 COL6A3P12111 3177 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 HEATR5AQ86XA9 2040 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 MAN1A2O60476 641 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CSO75390 466 aaKnown RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 UQCRC1P31930 480 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 TMED10P49755 219 aaKnown RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 RGS6P49758 472 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CLEC12AQ5QGZ9 265 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 GDPGP1Q6ZNW5 385 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CXXC5Q7LFL8 322 aaKnown RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 BCDIN3DQ7Z5W3 292 aaKnown RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 STK35Q8TDR2 534 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 ST8SIA1Q92185 356 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 KISS1RQ969F8 398 aaPredicted RBP15.69■□□□□ 0.1
VPS13B-201ENST00000355155 PMEPA1Q969W9 287 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 OPALINQ96PE5 141 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 TNFRSF13CQ96RJ3 184 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 FKRPQ9H9S5 495 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 CPNE5Q9HCH3 593 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 INPP5EQ9NRR6 644 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 ERGIC3Q9Y282 383 aa15.69■□□□□ 0.1
VPS13B-201ENST00000355155 USP34Q70CQ2 3546 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 ELOA3DA6NLF2 546 aaPredicted RBP15.68■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF354AO60765 605 aaPredicted RBP15.68■□□□□ 0.1
VPS13B-201ENST00000355155 SAGP10523 405 aaPredicted RBP15.68■□□□□ 0.1
VPS13B-201ENST00000355155 CD36P16671 472 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 HK1P19367 917 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 PTGDSP41222 190 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 CDH11P55287 796 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 C17orf67Q0P5P2 114 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 ELOA3BQ3SY89 546 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 FAAH2Q6GMR7 532 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 MEPCEQ7L2J0 689 aaKnown RBP15.68■□□□□ 0.1
VPS13B-201ENST00000355155 PIP4P1Q86T03 277 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 ELOA3Q8NG57 546 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 B4GALNT2Q8NHY0 566 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 SLC22A8Q8TCC7 542 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 ULBP3Q9BZM4 244 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 R4GN57 208 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 A0A1W2PPW3 197 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 SOCS6O14544 535 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 GAAP10253 952 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 FUT1P19526 365 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 MAP2K6P52564 334 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 GGTLC2Q14390 218 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 DESI1Q6ICB0 168 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 PLEKHA8Q96JA3 519 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 LIN28AQ9H9Z2 209 aaKnown RBP15.68■□□□□ 0.1
VPS13B-201ENST00000355155 SIAEQ9HAT2 523 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 TMEM9BQ9NQ34 198 aa15.68■□□□□ 0.1
VPS13B-201ENST00000355155 GDF9O60383 454 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 BGLAPP02818 100 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 ETV5P41161 510 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 POLR2HP52434 150 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms